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Series GSE174664 Query DataSets for GSE174664
Status Public on May 19, 2021
Title Genomic modules and intramodular networks of susceptibility and resilience in multimodeled stress in male mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary It was our goal to discern the genomic signatures of the ventral hippocampus, in male mice after exposure to exogenous corticosterone, an animal model that induces a blunted response to stress. In addition to wildtype mice, we used mice heterozygous for the single nucleotide polymorphism of the gene encoding for brain-derived neurotrophic factor, BDNF Val66Met, a mouse model that shows susceptibility to stress.
 
Overall design Wild-type mice or BDNF Val66Met male mice were maintained on chronic oral corticosterone or vehicle for six weeks prior dissection of the ventral hippocampus and extraction of RNA for sequencing.
VV/WT = Wildtyple, VM/BDNF = Heterozygous BDNF Val66Met, VEH = vehicle, CORT = corticosterone
 
Contributor(s) Caradonna SG, Marrocco J, Einhorn NR
Citation(s) 34848858
Submission date May 18, 2021
Last update date Dec 13, 2021
Contact name Jordan Marrocco
E-mail(s) jmarrocco@rockefeller.edu
Phone 2123278625
Organization name The Rockefeller University
Lab McEwen
Street address 1230 York Ave
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (12)
GSM5322090 VV Veh 1
GSM5322091 VV Veh 2
GSM5322092 VV Veh 3
Relations
BioProject PRJNA730919
SRA SRP320411

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE174664_limmaVoom-male-BDNF.VEH.vs.BDNF.CORT.csv.gz 1.3 Mb (ftp)(http) CSV
GSE174664_limmaVoom-male-WT.VEH.vs.WT.CORT.csv.gz 1.2 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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