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Series GSE174426 Query DataSets for GSE174426
Status Public on Sep 27, 2021
Title Global transcriptome profiling hnRNP LL depleted 293T cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We performed RNA-seq of 293T cells post depletion of hnRNP LL to look for changes brought about in the transcriptome.
 
Overall design For transcriptome analysis, 293T cells were treated with scramble siRNA pool or siRNA targetting hnRNP LL. Cells were treated for 72 hours with the siRNAs before proceeding for RNA extraction.
 
Contributor(s) Bhattacharya S, Workman J
Citation(s) 34750379
Submission date May 13, 2021
Last update date Nov 30, 2021
Contact name Ning Zhang
E-mail(s) nzhang@stowers.org
Organization name Stowers Institute for Medical Research
Street address 1000 E. 50th Street
City Kansas City
State/province MO
ZIP/Postal code 64110
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (4)
GSM5311308 siScramble rep3
GSM5311309 siScramble rep4
GSM5311310 sihnRNP LL rep2
Relations
BioProject PRJNA729793
SRA SRP319769

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE174426_gene.rsem_tpm.txt.gz 663.3 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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