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Series GSE173771 Query DataSets for GSE173771
Status Public on Mar 16, 2022
Title RNAseq analysis of human macrophages differentiated from monocytes exposed to extracellular vesicles from tumor cells or recombinant CSF-1
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Tumor associated macrophages (TAMs), which differentiate from circulating monocytes, are pervasive across human cancers and comprise heterogeneous populations. The contribution of tumor-derived signals to TAM heterogeneity is not well understood. In particular, tumors release both soluble factors and extracellular vesicles (EVs), whose respective impact on TAM precursors may be different. Here, we show that triple negative breast cancer cells (TNBC) release EVs and soluble molecules promoting monocyte differentiation towards distinct macrophage fates.
 
Overall design Human CD14+ monocytes were cultured with extracellular vesicles from MDA-MB-231 tumor cells (0.02 ng/ml) or recombinant CSF-1 (100 ng/ml) for 5 days.
 
Contributor(s) Segura E, Tkach M, Théry C
Citation(s) 35439048
Submission date May 03, 2021
Last update date Apr 28, 2022
Contact name Elodie Segura
E-mail(s) elodie.segura@curie.fr
Phone +336156246720
Organization name Institut Curie
Department INSERM U932
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (20)
GSM5278003 D302T25 EV-R
GSM5278004 D302T26 EV-poor
GSM5278005 D302T27 concentrated conditioned medium
Relations
BioProject PRJNA726999
SRA SRP318246

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE173771_tablecounts_raw.txt.gz 995.5 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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