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Series GSE17311 Query DataSets for GSE17311
Status Public on Aug 01, 2009
Title Runx1 (Aml1) knockdown in AMkL Meg-01 cells
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Transcriptional profiling of the effect of shRNA silencing of Runx1 in human AMkL Meg-01 cells. RNA samples obtained from two independent colonies were compared to RNAs from negative control transductions in a two-color design. A total of four microarrays were completed, with a dye-swapped pair performed for each colony.
Overall design Two-condition experiment, Runx1 knockdown vs. negative transduction controls. Biological replicates: 2 knockdown replicates, 2 control replicates.
Contributor(s) Ge Y
Citation(s) 19638627
Submission date Jul 24, 2009
Last update date Feb 22, 2018
Contact name Yubin Ge
Phone 313 578-4285
Organization name Karmanos Cancer Institute
Street address 110 East Warren Ave.
City Detroit
State/province MI
ZIP/Postal code 48201
Country USA
Platforms (1)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
Samples (4)
GSM433163 Meg-01 Runx1 ko #1 vs. Meg-01 negative control #1 + orientation
GSM433164 Meg-01 Runx1 ko #1 vs. Meg-01 negative control #1 - orientation
GSM433165 Meg-01 Runx1 ko #2 vs. Meg-01 negative control #2 + orientation
BioProject PRJNA118979

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE17311_RAW.tar 68.3 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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