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Series GSE173028 Query DataSets for GSE173028
Status Public on Apr 22, 2021
Title ATAC-seq from heart (ENCSR451NAE)
Project Mouse ENCODE
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ATAC-seq on postnatal p0 mouse heart

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR451NAE/
 
Citation(s) 22955616
BioProject PRJNA63471
Submission date Apr 21, 2021
Last update date May 07, 2021
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (2)
GSM5259231 ATAC-seq from heart (ENCLB749GLW)
GSM5259232 ATAC-seq from heart (ENCLB122XDP)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE173028_ENCFF036KVE_pseudoreplicated_peaks_mm10.bigBed 6.3 Mb (ftp)(http) BIGBED
GSE173028_ENCFF043FFE_IDR_ranked_peaks_mm10.bed.gz 5.6 Mb (ftp)(http) BED
GSE173028_ENCFF083ORP_conservative_IDR_thresholded_peaks_mm10.bed.gz 1.3 Mb (ftp)(http) BED
GSE173028_ENCFF115DQR_replicated_peaks_mm10.bigBed 6.2 Mb (ftp)(http) BIGBED
GSE173028_ENCFF341IAW_replicated_peaks_mm10.bed.gz 2.6 Mb (ftp)(http) BED
GSE173028_ENCFF377TWI_pseudoreplicated_peaks_mm10.bed.gz 2.7 Mb (ftp)(http) BED
GSE173028_ENCFF384BWM_signal_p-value_mm10.bigWig 584.4 Mb (ftp)(http) BIGWIG
GSE173028_ENCFF588KNX_IDR_ranked_peaks_mm10.bed.gz 5.6 Mb (ftp)(http) BED
GSE173028_ENCFF623XON_IDR_thresholded_peaks_mm10.bed.gz 1.4 Mb (ftp)(http) BED
GSE173028_ENCFF819XUN_conservative_IDR_thresholded_peaks_mm10.bigBed 3.0 Mb (ftp)(http) BIGBED
GSE173028_ENCFF867YOB_IDR_thresholded_peaks_mm10.bigBed 3.2 Mb (ftp)(http) BIGBED
GSE173028_ENCFF982LHR_fold_change_over_control_mm10.bigWig 831.1 Mb (ftp)(http) BIGWIG
GSE173028_RAW.tar 1.7 Gb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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