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Series GSE172363 Query DataSets for GSE172363
Status Public on Feb 28, 2022
Title Combination treatment with BMI1 and MAPK/ERK inhibitors is effective in medulloblastoma
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Epigenetic changes play a key role in the pathogenesis of medulloblastoma (MB), the most common malignant pediatric brain tumor. Here we identify a synergic vulnerability of BMI1High;CHD7Low MB cells to a combination treatment with BMI1 and MAPK/ERK inhibitors and we elucidate the molecular mechanisms underpinning the CHD7-BMI1-MAPK regulatory axis which mediates the anti-tumor effect of these inhibitors in vitro and in vivo, in a pre-clinical mouse model. Enhanced ERK1 and ERK2 phosphorylation activity is found in BMI1High;CHD7Low G4 MB patients, raising the possibility that they could be amenable to a similar therapy.
 
Overall design RNA-Seq of MB cells treated with BMI1 and MAPK/ERK inhibitors.
 
Contributor(s) Badodi S, Pomella N, Marino S
Citation(s) 35213723
Submission date Apr 19, 2021
Last update date Jun 08, 2022
Contact name Silvia Marino
E-mail(s) s.marino@qmul.ac.uk
Organization name Queen Mary University of London
Street address 4, Newark St
City London
State/province -
ZIP/Postal code E12AT
Country United Kingdom
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (20)
GSM5253196 28h_1299_4_Scr_DMSO
GSM5253197 28h_1299_4_Scr_1uM_PTC
GSM5253198 28h_1299_4_Scr_100nM_PD
Relations
BioProject PRJNA723029
SRA SRP315400

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172363_p180443.counts.xlsx 3.5 Mb (ftp)(http) XLSX
GSE172363_p180648.counts.xlsx 3.5 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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