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Series GSE172310 Query DataSets for GSE172310
Status Public on Jun 14, 2021
Title ChIP-seq analysis of H3K4me3, H3K27ac and H3K27me3 in the neural stem/progenitor cells under crotonate treatment
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To gain a deeper insight into how crotonate regulates embryonic neural stem/progenitor cells (NSPCs) proliferation and differentiation, ChIP-seq was performed to analyze the genome-wide changes of H3K4me3, H3K27ac and H3K27me3 stimulated with crotonate in E13.5 NSPCs.
 
Overall design ChIP-seq was performed before and after crotonate treatment, and sequenced on Illumina NovaSeq 6000 platform.
 
Contributor(s) Dai S
Citation(s) 34369651
Submission date Apr 19, 2021
Last update date Aug 10, 2021
Contact name Peipei liu
E-mail(s) strawberrylpp@163.com
Phone 13041069075
Organization name institute of zoology,Chinese academy of sciences
Department State Key Laboratory of Stem cells and Reproductive Biology
Lab Group of Stem Cell and Neurological Diseases
Street address No. 25-1 West Beisihuan Rd, Haidian District, Beijing
City beijing
ZIP/Postal code 100101
Country China
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (10)
GSM5252251 ChIP-seq_Control-H3K4me3
GSM5252252 ChIP-seq_Control-H3K9cr
GSM5252253 ChIP-seq_Control-H3K27ac
Relations
BioProject PRJNA722911
SRA SRP315320

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172310_RAW.tar 1.0 Gb (http)(custom) TAR (of BW, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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