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Series GSE172287 Query DataSets for GSE172287
Status Public on Aug 27, 2021
Title micro-RNA deregulation in cancer-associated fibroblasts in oral squamous cell carcinoma
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary micro-RNA in cancer-associated fibroblasts in oral squamous cell carcinoma vs. dysplasia-associated fibroblasts from dysplastic oral lesions vs. normal fibroblasts from normal oral mucosa from healthy individual.
 
Overall design Total RNA from fibroblasts cultured in 3D collagen I matrix was isolated, enriched for small RNA and subjected to microRNA profiling using Illumina microarray v2 panel. There are no replicates for the samples.
 
Citation(s) 34769388
Submission date Apr 18, 2021
Last update date Feb 08, 2022
Contact name Saroj Rajthala
E-mail(s) pasa_saroj_7@hotmail.com
Organization name University of Bergen
Department Department of Clinical Medicine
Lab Oral Pathology
Street address Jonas Lies vei 87
City Bergen
State/province Hordaland
ZIP/Postal code N-5021
Country Norway
 
Platforms (1)
GPL8179 Illumina Human v2 MicroRNA expression beadchip
Samples (24)
GSM5251883 Normal Oral Fibroblast [DanaCosteaud1]
GSM5251884 Normal Oral Fibroblast [DanaCosteaud2]
GSM5251885 Normal Oral Fibroblast [DanaCosteaud3]
Relations
BioProject PRJNA722753

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172287_RAW.tar 70.0 Kb (http)(custom) TAR
GSE172287_non-normalized.txt.gz 512.9 Kb (ftp)(http) TXT
Processed data included within Sample table
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