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Series GSE171277 Query DataSets for GSE171277
Status Public on Aug 09, 2021
Title Characterization of tumor associated macrophages (TAM) in the tumor microenvironment of human melanoma
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Tumor cells attract and dynamically interact with monocytes/macrophages to subvert their differentiation into tumor associated macrophages (TAMs), which mainly promote immunosuppression and neoplastic progression, but the pathways and microenvironmental cues governing their protumoral deviation are not completely understood. Thus, identifying molecular pathways responsible for TAM differentiation may provide new therapeutic targets to improve the efficacy of immunotherapy of cancer.
 
Overall design mRNA profiles of TAM ex vivo and in vitro in human melanoma. Ex vivo TAM were isolated from human skin melanoma. Monocytes from patients with melanoma were also isolated. In vitro TAM were created by coculturing monocytes or macrophages (M-CSF or GM-CSF differentiated) with different melanoma cell lines (BLM, A375 and SKMEL103) for 24 hours. All samples have been processed in triplicates
 
Contributor(s) Gutiérrez Seijo A, Samaniego García R, Sánchez-Mateos P, Barrio Alonso C, García Martínez E
Citation(s) 34439098
Submission date Mar 31, 2021
Last update date Aug 31, 2021
Contact name Rafael Samaniego
E-mail(s) inmunooncolab@gmail.com
Organization name Fundación para la Investigación Biomédica del Hospital Gregorio Marañón
Lab Inmunooncología
Street address Calle Dr Esquerdo 46
City Madrid
ZIP/Postal code 28007
Country Spain
 
Platforms (1)
GPL28038 DNBSEQ-G400 (Homo sapiens)
Samples (39)
GSM5221712 Mo 275
GSM5221713 Mo 276
GSM5221714 Mo 279
Relations
BioProject PRJNA718886
SRA SRP312963

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE171277_Allsamples_fpkm.txt.gz 1.1 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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