NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE170876 Query DataSets for GSE170876
Status Public on Mar 30, 2021
Title ATAC-seq from right lobe of liver (ENCSR607BTF)
Project ENCODE
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ATAC-seq on human right lobe of liver

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR607BTF/
 
Citation(s) 22955616
BioProject PRJNA63443
Submission date Mar 27, 2021
Last update date Apr 02, 2021
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (2)
GSM5215611 ATAC-seq from right lobe of liver (ENCLB115ETJ)
GSM5215612 ATAC-seq from right lobe of liver (ENCLB589CNK)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE170876_ENCFF030EES_IDR_thresholded_peaks_GRCh38.bigBed 8.9 Mb (ftp)(http) BIGBED
GSE170876_ENCFF258LPU_signal_p-value_GRCh38.bigWig 1.5 Gb (ftp)(http) BIGWIG
GSE170876_ENCFF347HUL_IDR_thresholded_peaks_GRCh38.bed.gz 4.1 Mb (ftp)(http) BED
GSE170876_ENCFF415YNL_pseudoreplicated_peaks_GRCh38.bed.gz 6.3 Mb (ftp)(http) BED
GSE170876_ENCFF646EEM_fold_change_over_control_GRCh38.bigWig 2.5 Gb (ftp)(http) BIGWIG
GSE170876_ENCFF770GTB_pseudoreplicated_peaks_GRCh38.bigBed 13.4 Mb (ftp)(http) BIGBED
GSE170876_ENCFF948WBQ_IDR_ranked_peaks_GRCh38.bed.gz 13.2 Mb (ftp)(http) BED
GSE170876_RAW.tar 10.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap