NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE170747 Query DataSets for GSE170747
Status Public on Mar 30, 2021
Title ATAC-seq from lower lobe of right lung (ENCSR948MQC)
Project ENCODE
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ATAC-seq on human lower lobe of right lung

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR948MQC/
 
Citation(s) 22955616
BioProject PRJNA63443
Submission date Mar 27, 2021
Last update date Apr 02, 2021
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (2)
GSM5215348 ATAC-seq from lower lobe of right lung (ENCLB954AUD)
GSM5215349 ATAC-seq from lower lobe of right lung (ENCLB485ZFG)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE170747_ENCFF382VVV_pseudoreplicated_peaks_GRCh38.bigBed 12.4 Mb (ftp)(http) BIGBED
GSE170747_ENCFF410SKR_signal_p-value_GRCh38.bigWig 2.1 Gb (ftp)(http) BIGWIG
GSE170747_ENCFF602QIC_IDR_thresholded_peaks_GRCh38.bigBed 7.3 Mb (ftp)(http) BIGBED
GSE170747_ENCFF634JAM_fold_change_over_control_GRCh38.bigWig 3.9 Gb (ftp)(http) BIGWIG
GSE170747_ENCFF778HMH_IDR_thresholded_peaks_GRCh38.bed.gz 3.5 Mb (ftp)(http) BED
GSE170747_ENCFF896AUD_IDR_ranked_peaks_GRCh38.bed.gz 12.4 Mb (ftp)(http) BED
GSE170747_ENCFF901RIY_pseudoreplicated_peaks_GRCh38.bed.gz 5.8 Mb (ftp)(http) BED
GSE170747_RAW.tar 10.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap