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Series GSE169732 Query DataSets for GSE169732
Status Public on Jun 01, 2021
Title Genome-wide analysis of SHOX targets in NHDF cells expressing SHOX WT vs SHOX HM mutant
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To elucidate the underlying molecular mechanisms and to better understand the broad phenotypic spectrum of SHOX deficiency, we aimed to identify novel SHOX targets. We analyzed differentially expressed genes in SHOX-overexpressing human fibroblasts (NHDF)
 
Overall design Total RNA obtained from SHOX WT and SHOX HM overexpressing NHDF cells after 6,12 and 24 hours of transfection
 
Contributor(s) Hoffmann S, Roeth R
Citation(s) 34122528
Submission date Mar 26, 2021
Last update date Jun 25, 2021
Contact name Sandra Hoffmann
Organization name University of Heidelberg
Department Human Molecular Genetics
Street address Im Neuneheimer Feld 366
City Heidelberg
ZIP/Postal code 69120
Country Germany
 
Platforms (1)
GPL6104 Illumina humanRef-8 v2.0 expression beadchip
Samples (6)
GSM5213134 6h_wt_SHOX
GSM5213135 6h_HM_SHOX
GSM5213136 12h_wt_SHOX
Relations
BioProject PRJNA717783

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE169732_RAW.tar 9.9 Mb (http)(custom) TAR (of IDAT)
GSE169732_Supplementary_Table_2_Microarray_NHDF_6h.xls.gz 8.3 Mb (ftp)(http) XLS
GSE169732_Supplementary_Table_3_Microarray_NHDF_12h.xls.gz 8.4 Mb (ftp)(http) XLS
GSE169732_Supplementary_Table_4_Microarray_NHDF_24h.xls.gz 9.0 Mb (ftp)(http) XLS
Processed data included within Sample table
Processed data are available on Series record

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