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Series GSE169561 Query DataSets for GSE169561
Status Public on May 05, 2022
Title In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35817979
Submission date Mar 24, 2021
Last update date Jul 14, 2022
Contact name Rafael Domínguez Acemel
E-mail(s) rdacemel@gmail.com
Organization name Max Delbrück Center for Molecular Medicine (MDC)
Department Berlin Institute of Medical Systems Biology (BIMSB)
Lab AG Lupiañez
Street address Hannoversche Str. 28
City Berlin
State/province Berlin
ZIP/Postal code 10115
Country Germany
 
Platforms (3)
GPL19057 Illumina NextSeq 500 (Mus musculus)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (42)
GSM5209155 Capture-C in E11.5 distal-limbs from ΔF-all mutant embryos
GSM5209156 Capture-C in E11.5 distal-limbs from ΔF-all-Inv mutant embryos
GSM5209157 Capture-C in E11.5 distal-limbs from ΔR1+F2 mutant embryos
This SuperSeries is composed of the following SubSeries:
GSE169548 In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation [Capture-C]
GSE169558 In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation [ChIP-seq]
GSE197629 In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation [ChIPmentation]
Relations
BioProject PRJNA717002

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE169561_RAW.tar 178.2 Mb (http)(custom) TAR (of BW, HIC)
SRA Run SelectorHelp
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