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Series GSE168515 Query DataSets for GSE168515
Status Public on Mar 09, 2021
Title Effect of TEAD4 on gene transcriptional responsiveness to TGF - β in HCCLM3 cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary 100 pM of recombinant TGF-β1 protein was used to stimulate the TEAD4-expressing HCCLM3 stable cells or the vector-expressing control cells for different time periods (0 / 4 / 12 h). Then cells were harvested for total RNA extraction and RNA-Seq analysis. Genes whose transcriptional responsiveness to TGF-β1 was attenuated by TEAD4 were underscored.
 
Overall design vector/TGF-β1 (0, 4, 12h, respectively) and TEAD4/TGF-β1 (0, 4, 12h, respectively), 6 samples altogether
 
Contributor(s) Yan X
Citation(s) 36806855
Submission date Mar 08, 2021
Last update date Sep 14, 2023
Contact name Xiaohua Yan
E-mail(s) yanxiaohua@ncu.edu.cn
Organization name Nanchang University
Street address No. 1299, Xuefu Avenue, Honggutan
City Nanchang
ZIP/Postal code 330031
Country China
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (6)
GSM5145198 vector/TGF-β(0h)
GSM5145199 vector/TGF-β(4h)
GSM5145200 vector/TGF-β(12h)
Relations
BioProject PRJNA707594

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE168515_All_Differential_Expression_Genes_Fold_Change_Summary.txt.gz 17.0 Kb (ftp)(http) TXT
GSE168515_Raw_gene_counts_matrix.txt.gz 266.4 Kb (ftp)(http) TXT
Raw data not provided for this record
Processed data are available on Series record

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