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| Status |
Public on Sep 08, 2021 |
| Title |
Transcriptomic response of Xanthomonas campestris pv. campestris after exposure to allyl-isothiocyanate and indol-3 carbinol |
| Organism |
Xanthomonas campestris pv. campestris |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We performed a transcriptomic analysis of the necrotrophic bacteria Xanthomonas campestris pv. campestris exposed to two different isothiocyanates (allyl-isothiocyanate and indol-3-carbinol), searching for mechanisms of adaptation and detoxification of these chemicals.
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| Overall design |
Three comparisons were performed: allyl-isothiocyanate vs control, indol-3-carbinol vs control and allyl-isothiocyanate vs indol-3-carbinol. Two repetitions of each treatment were performed.
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| Contributor(s) |
Soengas P, Madloo P, Lema M |
| Citation(s) |
34451701 |
| |
| Submission date |
Feb 25, 2021 |
| Last update date |
Sep 08, 2021 |
| Contact name |
Pilar Soengas |
| E-mail(s) |
psoengas@mbg.csic.es
|
| Phone |
+34986854800
|
| Organization name |
CSIC
|
| Department |
Brassica Genetic and Biochemistry
|
| Street address |
Palacio de Salcedo
|
| City |
Pontevedra |
| State/province |
Pontevedra |
| ZIP/Postal code |
36080 |
| Country |
Spain |
| |
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| Platforms (1) |
| GPL24162 |
Illumina HiSeq 2000 (Xanthomonas campestris pv. campestris) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA704950 |
| SRA |
SRP308233 |
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