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| Status |
Public on Jul 09, 2009 |
| Title |
Analysis of Gene Expression in Tissues of Two Turmeric Varieties at Different Developmental Stages |
| Platform organisms |
Zingiber officinale; Curcuma longa |
| Sample organism |
Curcuma longa |
| Experiment type |
Expression profiling by array
|
| Summary |
Two varieties of turmeric, FMO (Fat Mild Orange) and TYA (Thin Yellow Aromatic) were compared. Rhizomes were harvested 3, 5, and 7 months after planting, roots were harvested at 7 months, and leaves were harvested at 7 months. Plants were grown under controlled conditions in the greenhouse.
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| Overall design |
We used an interwoven loop design for hybridizations. There are two interwoven loops included in this experiment, one for rhizome samples from the different developmental stages, and a second for leaf and root 7 month old samples compared to 7 month old rhizome samples. The two loops were connected at the 7 month old rhizome samples.
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| Contributor(s) |
Gang DR, Koo H, Ma X |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
Jun 20, 2009 |
| Last update date |
Mar 21, 2012 |
| Contact name |
David R Gang |
| E-mail(s) |
gang@ag.arizona.edu
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| Phone |
520-621-7154
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| Fax |
520-626-4824
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| URL |
http://ag.arizona.edu/research/ganglab/index.htm
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| Organization name |
The University of Arizona
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| Department |
Plant Sciences
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| Lab |
Laboratory for Cellular Metabolism and Engineering
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| Street address |
1657 E Helen Street
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| City |
Tucson |
| State/province |
AZ |
| ZIP/Postal code |
85721 |
| Country |
USA |
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| Platforms (1) |
| GPL8746 |
Gang Lab (Agilent)_Z.Officinale/C.Longa_15K array |
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| Samples (24)
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| GSM419223 |
FMO Rhizome 3 month/FMO Rhizome 5 month |
| GSM419224 |
FMO Rhizome 3 month/FMO Rhizome 7 month |
| GSM419225 |
TYA Rhizome 3 month/FMO Rhizome 3 month |
| GSM419226 |
TYA Rhizome 5 month/FMO Rhizome 3 month |
| GSM419227 |
FMO Rhizome 5 month/FMO Rhizome 7 month |
| GSM419229 |
FMO Rhizome 5 month/TYA Rhizome 7 month |
| GSM419230 |
TYA Rhizome 3 month/FMO Rhizome 5 month |
| GSM419231 |
FMO Rhizome 7 month/TYA Rhizome 7 month |
| GSM419232 |
FMO Rhizome 7 month/TYA Rhizome 5 month |
| GSM419233 |
TYA Rhizome 7 month/TYA Rhizome 5 month |
| GSM419234 |
TYA Rhizome 7 month/TYA Rhizome 3 month |
| GSM419235 |
TYA Rhizome 5 month/TYA Rhizome 3 month |
| GSM419236 |
FMO Root 7 month/ FMO Rhizome 7 month |
| GSM419237 |
FMO Root 7 month/TYA Rhizome 7 month |
| GSM419238 |
FMO Leaf 7 month/FMO Root 7 month |
| GSM419239 |
TYA Leaf 7 month/ FMO Root 7 month |
| GSM419240 |
FMO Leaf 7 month/FMO Rhizome 7 month |
| GSM419241 |
TYA Leaf 7 month/FMO Leaf 7 month |
| GSM419242 |
TYA Root 7 month/FMO Leaf 7 month |
| GSM419243 |
TYA Root 7 month/TYA Leaf 7 month |
| GSM419244 |
TYA Rhizome 7 month/TYA Leaf 7 month |
| GSM419245 |
FMO Rhizome 7 month/TYA Root 7 month |
| GSM419246 |
TYA Root 7 month/TYA Root 7 month |
| GSM419247 |
TYA Rhizome 7 month/FMO Rhizome 7 month |
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| This SubSeries is part of SuperSeries: |
| GSE16982 |
Ginger and Turmeric microarray in different tissues at different developmental stages |
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| Relations |
| BioProject |
PRJNA122729 |
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