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| Status |
Public on Feb 28, 2021 |
| Title |
4C contact profiles of the Pcdh-b enhancers HS18-20 |
| Organism |
Mus musculus |
| Experiment type |
Other
|
| Summary |
We performed 4C-seq to measure the chromatin contact changes between Pcdh-b and their enhancers, HS18-20.
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| Overall design |
Chromatin contact profiles in control or RAD21-TEV cleaved cells were generated by 4C. Contents of processed data files: column 1 - the starting coordinate of the 1kb bin, 2 - the mean of values within a 2kb window, 3 - the 80th quantile of values, and 4 - the 20th quantile of values
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| |
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| Contributor(s) |
Guo Y, Wang Y, Weiss F, Merkenschlager M |
| Citation(s) |
34006846 |
| |
| Submission date |
Feb 18, 2021 |
| Last update date |
Jun 03, 2021 |
| Contact name |
LMS Bioinformatics Core |
| E-mail(s) |
bioinformatics@lms.mrc.ac.uk
|
| Organization name |
MRC London Institute of Medical Sciences
|
| Department |
Bioinformatics Core
|
| Street address |
Hammersmith Hospital Campus, Du Cane Road
|
| City |
London |
| ZIP/Postal code |
W12 0NN |
| Country |
United Kingdom |
| |
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| Platforms (1) |
| GPL17021 |
Illumina HiSeq 2500 (Mus musculus) |
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| Samples (8)
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| This SubSeries is part of SuperSeries: |
| GSE150130 |
Partial rescue of neuronal genes deregulated in CdLS by cohesin |
|
| Relations |
| BioProject |
PRJNA702784 |
| SRA |
SRP307002 |
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