|
| Status |
Public on Jul 01, 2021 |
| Title |
RNA-sequencing of whole tissue samples from patients with inflammatory bowel disease and colorectal cancer |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
3'-end RNA sequencing of inflamed and non-inflamed resected intestial tissue from IBD patients, as well as from non-tumor intestinal tissue resected from patients with colorectal cancer
|
| |
|
| Overall design |
transcript quantification in inflamed, non-inflamed and control tissue
|
| |
|
| Contributor(s) |
Rue-Albrecht K, Friedrich M, Bullers S, Christoforidou Z |
| Citation(s) |
34675383 |
| |
| Submission date |
Feb 17, 2021 |
| Last update date |
Oct 28, 2021 |
| Contact name |
Fiona Powrie |
| E-mail(s) |
fiona.powrie@kennedy.ox.ac.uk
|
| Organization name |
University of Oxford
|
| Department |
Nuffield Department of Orthopaedics, Rheumatology, and Musculoskeletal Sciences
|
| Lab |
Kennedy Institute of Rheumatology
|
| Street address |
Roosevelt Drive
|
| City |
Oxford |
| ZIP/Postal code |
OX3 7FY |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
|
| Samples (96)
|
|
| This SubSeries is part of SuperSeries: |
| GSE166928 |
IL-1-driven stromal-neutrophil interactions define a subset of patients with inflammatory bowel disease that does not respond to therapies |
|
| Relations |
| BioProject |
PRJNA702434 |
| SRA |
SRP306823 |
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