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Series GSE165959 Query DataSets for GSE165959
Status Public on May 19, 2022
Title H3K4 demethylase KDM5B regulates epigenetic plasticity and cancer cell identity
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 35440714
Submission date Feb 01, 2021
Last update date May 22, 2022
Contact name Benjamin L Kidder
E-mail(s) benjamin.kidder@wayne.edu
Organization name Wayne State University
Department Oncology
Lab Laboratory of Epigenomics
Street address 4100 John R St
City Detroit
State/province MI
ZIP/Postal code 48201
Country USA
 
Platforms (2)
GPL20795 HiSeq X Ten (Homo sapiens)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (208)
GSM5059260 H3K4me3_BT-549_shLuc_ctrl_rep1
GSM5059261 H3K4me3_BT-549_shLuc_ctrl_rep2
GSM5059262 H3K4me3_MCF7_shLuc_ctrl_rep1
This SuperSeries is composed of the following SubSeries:
GSE165957 H3K4 demethylase KDM5B regulates epigenetic plasticity and cancer cell identity [ChIP-seq]
GSE165958 H3K4 demethylase KDM5B regulates epigenetic plasticity and cancer cell identity [RNA-seq]
Relations
BioProject PRJNA698662

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165959_RAW.tar 6.8 Gb (http)(custom) TAR (of BEDGRAPH, TXT)
SRA Run SelectorHelp
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