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Series GSE165404 Query DataSets for GSE165404
Status Public on Sep 01, 2021
Title Targeting TREM2 on tumor associated macrophages enhances efficacious immunotherapy
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Singe-cell transcriptomic profiling of immune cells from human tumors and the CT26 murine syngeneic tumor model
 
Overall design 10X Genomics single-cell RNA sequencing of CD45+ sorted immune cells from 10 human tumors and 1 murine syngenic model
 
Contributor(s) Sriram V, Binnewies M
Citation(s) 34686340
Submission date Jan 24, 2021
Last update date Dec 01, 2021
Contact name Venkataraman Sriram
Organization name Pionyr Immunotherapeutics
Street address 2 Tower Place
City South San Francisco
State/province California
ZIP/Postal code 94080
Country USA
 
Platforms (2)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (15)
GSM5032880 CT26_untreated
GSM5032881 CT26_Isotype
GSM5032882 CT26_TREM2
Relations
BioProject PRJNA694436
SRA SRP303028

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165404_RAW.tar 1.3 Gb (http)(custom) TAR (of TAR)
GSE165404_cd8cd4_cell_gene_count_matrix.tsv.gz 38.7 Mb (ftp)(http) TSV
GSE165404_monomac_cell_gene_count_matrix.tsv.gz 94.4 Mb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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