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Series GSE165327 Query DataSets for GSE165327
Status Public on Jul 20, 2021
Title Real-time quantitative PCR analysis of PMA differentiated THP-1 infected with H37Rv or M. marinum, or heat killed H37Ra (HKMT)
Organism Homo sapiens
Experiment type Expression profiling by RT-PCR
Summary THP-1 cells were differentiated into macrophages with 0,1 µM PMA overnight then infected for 2 days with either H37Rv, M. marinum or heat killed H37Ra. Then RNA was collected in order to quantify the inflammatory response transcription as compared with the relative uninfected controls.
 
Overall design RNA quantity was normalized by using 500 ng Total RNA of each sample pror to RT-PCR. Each sample was treated equally.
 
Contributor(s) Bade P, Simonetti F, Sans S, Laboudie P, Kissane K, Chappat N, Lagrange S, Apparailly F, Roubert C, Duroux-Richard I
Citation(s) 34276658
Submission date Jan 22, 2021
Last update date Jul 20, 2021
Contact name Pauline Bade
E-mail(s) bade_pauline@hotmail.com
Organization name Evotec LYON ID SAS
Street address 40 avenue Tony Garnier
City Lyon
ZIP/Postal code 69160
Country France
 
Platforms (1)
GPL29639 Custom TaqMan® Gene Expression Array Cards Inflammatory Response [Catalog# 4342253]
Samples (22)
GSM5031621 Ctrl-1-Mtb
GSM5031622 Ctrl-2-Mtb
GSM5031623 Ctrl-3-Mtb
Relations
BioProject PRJNA694111

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE165327_fold-change_data.txt.gz 8.6 Kb (ftp)(http) TXT
GSE165327_non-normalized_data.txt.gz 9.2 Kb (ftp)(http) TXT
GSE165327_normalized_data.txt.gz 9.6 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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