|
| Status |
Public on Jan 15, 2021 |
| Title |
Spatially mapped single-cell chromatin accessibility |
| Organisms |
Homo sapiens; Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
sciMAP-ATAC as a technology to produce single-cell ATAC-seq data with cells mapped to spatially-defined regions.
|
| |
|
| Overall design |
Single-cell ATAC-seq data including sci-ATAC-seq and sciMAP-ATAC-seq.
|
| |
|
| Contributor(s) |
Adey AC, Thornton CA |
| Citation(s) |
33627658 |
| |
| Submission date |
Jan 14, 2021 |
| Last update date |
Mar 16, 2021 |
| Contact name |
Andrew Adey |
| E-mail(s) |
adey@ohsu.edu
|
| Organization name |
Oregon Health & Science University
|
| Department |
MMG
|
| Lab |
Adey Lab
|
| Street address |
3181 S.W. Sam Jackson Park Rd, RHH, L103
|
| City |
Portland |
| State/province |
OR |
| ZIP/Postal code |
97239-3098 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
| GPL19057 |
Illumina NextSeq 500 (Mus musculus) |
|
| Samples (5)
|
|
| Relations |
| BioProject |
PRJNA692203 |
| SRA |
SRP301780 |
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