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| Status |
Public on Jul 11, 2021 |
| Title |
Tcf1/Lef1 transcription factors and CD8 T cell identity [ChIP-seq] |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
Determine genome-wide binding locations by Tcf1 in naive CD8+ T cells
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| Overall design |
Splenocytes were harvested from hCD2-Cre, Rosa26-lsl-GFP, Tcf1/Lef1 wild-type or double floxed mice, and sorted for GFP+TCRbeta+ naïve CD8+ T cells, followed by crosslinking and ChIPseq with Tcf1 antiserum
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| Contributor(s) |
Xue H, Peng W, Li X |
| Citation(s) |
34615872, 35882936 |
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| Submission date |
Jan 12, 2021 |
| Last update date |
Apr 03, 2023 |
| Contact name |
Weiqun Peng |
| E-mail(s) |
wpeng@gwu.edu
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| Organization name |
The George Washington University
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| Street address |
1918 F Street, NW , DC
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| City |
Washington |
| State/province |
DC |
| ZIP/Postal code |
20052 |
| Country |
USA |
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| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
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| Samples (2) |
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| This SubSeries is part of SuperSeries: |
| GSE164713 |
Tcf1/Lef1 transcription factors and CD8 T cell identity |
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| Relations |
| BioProject |
PRJNA691538 |
| SRA |
SRP301419 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE164670_22286_Sample_naiveCD8_TCF1_20160827000_peaks.xls.gz |
527.6 Kb |
(ftp)(http) |
XLS |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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