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Series GSE164525 Query DataSets for GSE164525
Status Public on Apr 01, 2021
Title Defining the lineage of thermogenic perivascular adipose tissue [Adult Aorta]
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Brown adipose tissue can expend large amounts of energy and thus increasing its amount or activity is a promising therapeutic approach to combat metabolic disease. In humans, major deposits of brown fat cells are found intimately associated with large blood vessels, corresponding to perivascular adipose tissue (PVAT). However, the cellular origins of PVAT are poorly understood. We applied single cell transcriptomic analyses, ex vivo adipogenesis assays, and genetic fate mapping to determine the identity of perivascular adipocyte progenitors. In mice, we found that thoracic PVAT develops from a fibroblastic lineage, consisting of progenitor cells (Pdgfra+; Ly6a+; Pparg-) and preadipocytes (Pdgfra+; Ly6a+; Pparg+). Progenitor and preadipocyte cells in PVAT shared transcriptional similarity with analogous cell types in white adipose tissue, pointing towards a conserved hierarchical structure of adipose lineage cells. Interestingly, the aortic adventitia of adult animals contained a novel population of adipogenic smooth muscle cells (SMCs) (Myh11+; Pdgfra-; Pparg+) that contributed to perivascular adipocyte formation. Similarly, human PVAT contained presumptive fibroblastic and SMC-like adipocyte progenitors, as revealed by single nucleus RNAseq. Taken together, these studies define distinct populations of progenitor cells for thermogenic PVAT, providing a foundation for developing strategies to augment brown fat activity
 
Overall design Transcriptome (mRNA) profiles of FACS isolated cell populations from the aorta and perivascular fat ( intermediate cells, progenitor cells, and smooth muscle cell (SMC) populations SMC1 and SMC2) from wild type (WT) adult (13 week old) male mice were generated by deep sequencing, in triplicate, followed by DESeq2 analysis for differential expression of genes between the various groups.
 
Contributor(s) Seale P, Angueira A, Sakers A
Citation(s) 33846639
Submission date Jan 10, 2021
Last update date Jul 01, 2021
Contact name Patrick Seale
E-mail(s) sealep@pennmedicine.upenn.edu
Organization name University of Pennsylvania
Street address Smilow Center for Translational Research, 12th Floor 3400 Civic Center Blvd.
City Philadelphia
State/province PA
ZIP/Postal code 19104
Country USA
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (12)
GSM5013327 Bulk RNA Seq of FACS Sorted Adult Perivascular Intermediate Cells [Ao1-Int]
GSM5013328 Bulk RNA Seq of FACS Sorted Adult Perivascular Progenitor Cells [Ao1-Prog]
GSM5013329 Bulk RNA Seq of FACS Sorted Adult Perivascular SMC1 Cells [Ao1-SMC_1]
This SubSeries is part of SuperSeries:
GSE164528 Defining the lineage of thermogenic perivascular adipose tissue
Relations
BioProject PRJNA691056
SRA SRP301140

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Supplementary file Size Download File type/resource
GSE164525_PVAT_Adult_NormalizedCounts.csv.gz 1.6 Mb (ftp)(http) CSV
GSE164525_PVAT_Adult_RLD.csv.gz 2.4 Mb (ftp)(http) CSV
GSE164525_PVAT_Adult_RawCounts.csv.gz 723.0 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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