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Series GSE164401 Query DataSets for GSE164401
Status Public on Sep 01, 2021
Title Exercise plasma dampens brain inflammation via clusterin and boosts memory
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We discovered “runner” plasma, collected from voluntarily running mice, infused into sedentary mice recapitulates the cellular and functional benefits of exercise on the adult brain. Importantly, runner plasma reduces baseline neuroinflammatory gene expression and experimentally induced brain inflammation. Plasma proteomic analysis revealed a striking increase in complement cascade inhibitors including clusterin (CLU), which is facilitating the anti-inflammatory effects of runner plasma. Intravenously injected CLU strongly binds to brain endothelial cells reducing their inflammatory gene expression in an acute model of brain inflammation and in Alzheimer’s disease model mice. These findings demonstrate the existence of anti-inflammatory “exercise factors” that are transferrable, target the cerebrovasculature and benefit the brain.
 
Overall design Identifying transcriptomic changes induced by exogenous clusterin on brain endothelial cells in two mouse models of acute (LPS) or chronic (APP) inflammation
 
Contributor(s) De Miguel Z, Khoury N, Yang A, Vest R, Lee D
Citation(s) 34880498
Submission date Jan 07, 2021
Last update date Dec 22, 2021
Contact name Nathalie Khoury
E-mail(s) nkhoury@stanford.edu
Phone 7862036144
Organization name Stanford University
Street address 3801 Miranda Avenue Blvd. 100 VAPA D3-111 - Neurology
City Palo Alto
State/province CA California
ZIP/Postal code 94304
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (73)
GSM5009111 Sal
GSM5009112 LPS
GSM5009113 LPS+Clu
Relations
BioProject PRJNA690545
SRA SRP300794

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE164401_CTX_counttable.txt.gz 711.9 Kb (ftp)(http) TXT
GSE164401_HC_RNAseq_LPS_SAL_RP_CP.xlsx 4.3 Mb (ftp)(http) XLSX
GSE164401_HC_RNAseq_RP_vs_CP.xlsx 2.3 Mb (ftp)(http) XLSX
GSE164401_RAW.tar 177.6 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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