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Series GSE163930 Query DataSets for GSE163930
Status Public on Jan 13, 2021
Title Serine biosynthesis is a metabolic vulnerability in FLT3-ITD-driven acute myeloid leukaemia [MV411_OCI-AML3_DMSO_AC220_24hr]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We performed 3'-RNA-Sequencing on RNA isolated from human MV4-11 and OCI-AML3 cells which had been treated with DMSO or the FLT3 inhibitor Quizartinib (AC220) to perform differential gene expression analysis.
 
Overall design Cells were treated with 5 nM Quizartinib (AC220) for 24 hours in vitro. Total RNA was isolated from cells and 3'-RNA libraries were prepared for next-generation sequencing.
 
Contributor(s) Bjelosevic S, Gruber E, Vervoort SJ, Brown KK, Johnstone RW
Citation(s) 33436370
Submission date Dec 28, 2020
Last update date Apr 14, 2021
Contact name Stefan Bjelosevic
E-mail(s) stefan.bjelosevic@petermac.org
Organization name Peter MacCallum Cancer Centre
Department Translational Haematology Program
Street address 305 Grattan Street
City Melbourne
State/province VIC
ZIP/Postal code 3000
Country Australia
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (12)
GSM4990806 MV4-11 DMSO 24 hr Replicate 1
GSM4990807 MV4-11 DMSO 24 hr Replicate 2
GSM4990808 MV4-11 DMSO 24 hr Replicate 3
This SubSeries is part of SuperSeries:
GSE163932 Serine biosynthesis is a metabolic vulnerability in FLT3-ITD-driven acute myeloid leukaemia
Relations
BioProject PRJNA688229
SRA SRP299462

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE163930_MV411_OCI-AML3_DMSO_AC220_24hr_Counts.csv.gz 357.3 Kb (ftp)(http) CSV
GSE163930_MV411_OCI-AML3_DMSO_AC220_24hr_Voom-Limma_Normalised.csv.gz 630.9 Kb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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