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Series GSE163235 Query DataSets for GSE163235
Status Public on Apr 12, 2021
Title Defining the regulons of Pseudomonas aeruginosa transcriptional regulators
Organism Pseudomonas aeruginosa
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 33921535, 34064685, 34254827, 34948137, 36498910
Submission date Dec 15, 2020
Last update date Jan 05, 2023
Contact name Adam KawaƂek
E-mail(s) a.kawalek@ibb.waw.pl
Phone +48225921216
Organization name Institute of Biochemistry and Biophysics, PAS
Department Department of Microbial Biochemistry
Street address Pawinskiego 5A
City Warszawa
ZIP/Postal code 02-106
Country Poland
 
Platforms (3)
GPL20881 Illumina MiSeq (Pseudomonas aeruginosa)
GPL21297 Illumina NextSeq 500 (Pseudomonas aeruginosa)
GPL26913 Illumina NovaSeq 6000 (Pseudomonas aeruginosa)
Samples (55)
GSM4975399 PAO1161 BsrA-F_1 ChIP-seq
GSM4975400 PAO1161 BsrA-F_2 ChIP-seq
GSM4975401 PAO1161 EV-F_1 ChIP-seq
This SuperSeries is composed of the following SubSeries:
GSE163233 The LysR-type transcriptional regulator BsrA (PA2121) is engaged in the control of vital metabolic pathways in Pseudomonas aeruginosa (ChIP-seq)
GSE163234 The LysR-type transcriptional regulator BsrA (PA2121) is engaged in the control of vital metabolic pathways in Pseudomonas aeruginosa (RNA-seq)
GSE163554 PA3027, a novel AraC-type transcriptional regulator activating genes of glycerolipid metabolism in Pseudomonas aeruginosa (F-PA3027 ChIP-seq)
Relations
BioProject PRJNA685406

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE163235_RAW.tar 472.7 Mb (http)(custom) TAR (of BIGWIG)
SRA Run SelectorHelp

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