 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Oct 28, 2021 |
| Title |
MARS Seq and total RNA seq data from human choroid plexus organoids |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We analyze gene expression data of human choroid plexus organoid development
|
| |
|
| Overall design |
Two developmental time points and two CHIR concentrations were examined
|
| |
|
| Contributor(s) |
Kshirsagar A, Paricha A, Tole S, Reiner O |
| Citation(s) |
35110543 |
| |
| Submission date |
Dec 07, 2020 |
| Last update date |
Feb 18, 2022 |
| Contact name |
Orly Reiner |
| E-mail(s) |
orly.reiner@weizmann.ac.il
|
| Organization name |
Weizmann Institute of Science
|
| Department |
Molecular Genetics
|
| Lab |
Orly Reiner
|
| Street address |
234, Herzl Street,
|
| City |
Rehovot |
| ZIP/Postal code |
76100 |
| Country |
Israel |
| |
|
| Platforms (2) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (12)
|
| GSM4960334 |
Organoids Day 18, wild-type, Repeat #1 - MARS-seq |
| GSM4960335 |
Organoids Day 18, wild-type, Repeat #2 - MARS-seq |
| GSM4960336 |
Organoids Day 18, wild-type, Repeat #3 - MARS-seq |
| GSM4960337 |
Organoids Day 30, wild-type, Repeat #1 - MARS-seq |
| GSM4960338 |
Organoids Day 30, wild-type, Repeat #2 - MARS-seq |
| GSM4960339 |
Organoids Day 30, wild-type, Repeat #3 - MARS-seq |
| GSM4960340 |
Organoids Day 30, wild-type, Repeat #1 - RNA-seq |
| GSM4960341 |
Organoids Day 30, wild-type, Repeat #2 - RNA-seq |
| GSM4960342 |
Organoids Day 30, wild-type, Repeat #3 - RNA-seq |
| GSM4960343 |
Organoids Day 30, wild-type, 12uM CHIR Repeat #1 - RNA-seq |
| GSM4960344 |
Organoids Day 30, wild-type, 12uM CHIR Repeat #2 - RNA-seq |
| GSM4960345 |
Organoids Day 30, wild-type, 12uM CHIR Repeat #3 - RNA-seq |
|
| Relations |
| BioProject |
PRJNA683061 |
| SRA |
SRP296832 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE162808_counts_chir_RNAseq.txt.gz |
307.8 Kb |
(ftp)(http) |
TXT |
| GSE162808_counts_tp_Mars-seq.txt.gz |
311.5 Kb |
(ftp)(http) |
TXT |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
|
|
|
|
 |
Less...
More...