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Series GSE162691 Query DataSets for GSE162691
Status Public on Jul 13, 2022
Title Human Mesenchymal Stem Cell-derived Knee Joint-on-a-Chip for Disease Modeling and Drug Testing
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Diseases of the knee joint such as osteoarthritis affect all joint elements. A human cell-derived ex vivo model capable of simulating intraarticular tissue crosstalk is desirable for studying etiologies/pathogenesis of joint diseases and testing potential therapeutics. Herein we generated a human mesenchymal stem cell-derived microphysiological joint-on-a-chip system (microJoint), in which engineered osteochondral, synovial, and adipose tissues were integrated into a microfluidics-enabled bioreactor. This novel design facilitated different tissues communicating while still maintaining their respective phenotypes. The microJoint exhibited physiologically relevant changes when exposed to interleukin-1β mediated inflammation, which were similar to observations in joint diseases in humans. The potential of the microJoint in predicting in vivo efficacy of drug treatment was confirmed by testing the “therapeutic effect” of the nonsteroidal anti-inflammatory drug, naproxen, as well as four other potential disease-modifying osteoarthritis drugs. The data demonstrate that the microJoint recapitulates complex tissue interactions, thus providing a robust model for the study of joint pathology and the development of novel therapeutic interventions.
 
Overall design mRNA profiles of 3 types of microtissues engineered from human mesenchymal stem cells and cultured in a microfluidic device that mimics healthy and inflamed human knee joint

MicroTissues used in this study:
AD: engineered adipose tissue
FT: engineered fibrous tissue
OC-O: osseous (bone) component of the engineered osteochondral tissue
OC-C: chondral (cartilage) component of the engineered osteochondral tissue
 
Contributor(s) Li Z, Lin Z, Liu S, Yagi H, Zhang X, Yocum L, Romero-Lopez M, Rhee C, O’Donnell B, Li EN, Hao T, Makarcyzk MJ, Goh KB, Alexander PG, Mahadik B, Fisher JP, Goodman SB, Bunnell BA, Tuan RS, Lin H
Citation(s) 35436042
Submission date Dec 04, 2020
Last update date Jul 15, 2022
Contact name Shuchang Liu
E-mail(s) shl96@pitt.edu
Organization name University of Pittsburgh
Street address 203 Lothrop Street
City Pittsburgh
State/province PA
ZIP/Postal code 15261
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (36)
GSM4957263 Control_AD_repeat1
GSM4957264 Control_AD_repeat2
GSM4957265 Control_AD_repeat3
Relations
BioProject PRJNA682626
SRA SRP295979

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162691_Gene_count.csv.gz 954.1 Kb (ftp)(http) CSV
GSE162691_RAW.tar 13.0 Gb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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