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Series GSE162611 Query DataSets for GSE162611
Status Public on Dec 04, 2020
Title Loss of SWI/SNF Chromatin Remodeling Alters NRF2 Signaling in Non-Small Cell Lung Carcinoma
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Purpose: RNA-seq of CRISPR Knockout of SMARCA4 and SMARCA2 in H358 focused on examining the effects of the knockouts on NRF2 signaling
 
Overall design CRISPR Knockout of SMARCA4 and SMARCA2 in H358. RNAseq was performed
 
Contributor(s) Nguyen V
Citation(s) 32855269
Submission date Dec 03, 2020
Last update date Dec 08, 2020
Contact name Vinh Nguyen
E-mail(s) vthen@unc.edu
Organization name UNC- Chapel Hill
Department Toxicology
Lab Weissman Lab
Street address 450 West Drive
City Chapel Hill
State/province NC
ZIP/Postal code 27516
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (9)
GSM4955369 H358 Parent 1
GSM4955370 H358 Parent 2
GSM4955371 H358 Parent 3
Relations
BioProject PRJNA682393
SRA SRP295674

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162611_RAW.tar 23.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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