|
| Status |
Public on Jun 15, 2021 |
| Title |
Identification of Snai1b targets in zebrafish heart by transcriptomic analysis |
| Organism |
Danio rerio |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Purpose: identifying, with RNA-seq, genes targets of Snai1b during zebrafish cardiac development. Results: we identified several differential expressed genes, in particular cytoskeletal genes. In particular, the intermediate filament gene desmin b is upregulated.
|
| |
|
| Overall design |
Hearts were manually dissected at 48 hpf from snai1b mutants and wild-type
|
| |
|
| Contributor(s) |
Gentile A, Guenther S |
| Citation(s) |
34152269 |
| |
| Submission date |
Dec 03, 2020 |
| Last update date |
Jul 02, 2021 |
| Contact name |
Stefan Günther |
| E-mail(s) |
stefan.guenther@mpi-bn.mpg.de
|
| Organization name |
MPI for heart and lung research
|
| Street address |
ludwigtr. 43
|
| City |
bad nauheim |
| ZIP/Postal code |
61231 |
| Country |
Germany |
| |
|
| Platforms (1) |
| GPL20828 |
Illumina NextSeq 500 (Danio rerio) |
|
| Samples (4)
|
|
| Relations |
| BioProject |
PRJNA682370 |
| SRA |
SRP295659 |
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