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Series GSE162402 Query DataSets for GSE162402
Status Public on Dec 31, 2021
Title Expression profiles and their potential roles of tRNA-derived small RNAs in hippocampus of nicotine dependence rat
Organism Rattus norvegicus
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary The mechanism of nicotine dependence and nicotine related pain remains unclear. tRNAs, a major source of small noncoding RNAs (ncRNA), are the immediate areas of research focus, which have an important role in many pathophysiological processes. However, the role of tRNAs on nicotine dependence and related pain hasn’t been explored yet. In this study, our results indicated that the expression profiles of tRNAs have changed in nicotine treated rats as compared with normal rats, and among those, some differentially expressed tRNAs might be novel targets for nicotine dependence or nicotine related pain.
 
Overall design The expression profiles of tRNAs sequences were conducted using RNA extracted from the hippocampus of nicotine and saline treat rats.
 
Contributor(s) Shao J, Yang J, Fei Y, Su C
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Dec 01, 2020
Last update date Jan 01, 2022
Contact name Jiali Shao
Organization name The affiliated Cancer Hospital of Xiangya School of Medicine, Central South University
Department Department of Anesthesiology
Street address 281 Tongzipo Road, Changsha, Hunan, China
City Changsha
State/province Hunan
ZIP/Postal code 410008
Country China
 
Platforms (1)
GPL20084 Illumina NextSeq 500 (Rattus norvegicus)
Samples (6)
GSM4951038 hippocampus of saline-treated rat 1
GSM4951039 hippocampus of saline-treated rat 2
GSM4951040 hippocampus of saline-treated rat 3
Relations
BioProject PRJNA681791
SRA SRP295305

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Supplementary file Size Download File type/resource
GSE162402_RAW.tar 200.0 Kb (http)(custom) TAR (of PNG, XLSX)
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Raw data are available in SRA
Processed data provided as supplementary file

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