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Series GSE162162 Query DataSets for GSE162162
Status Public on Mar 04, 2022
Title ANKRA2-regulated transcriptome in U2OS
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Identification of the ANKRA2-regulated transcriptome in Nutlin-3a and DMSO control treated U2OS cells
 
Overall design RNA-seq (PolyA) from Nutlin-3a and DMSO control treated U2OS cells transfected with siControl or siANKRA2
 
Contributor(s) Fischer M, Riege K, Hoffmann S
Citation(s) 39181888
Submission date Nov 25, 2020
Last update date Sep 27, 2024
Contact name Martin Fischer
E-mail(s) Martin.Fischer@leibniz-fli.de
Organization name Leibniz Institute on Aging - Fritz Lipmann Institute (FLI)
Department Computational Biology
Lab Steve Hoffmann
Street address Beutenbergstraße 11
City Jena
State/province Thuringia
ZIP/Postal code 07745
Country Germany
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (18)
GSM4943739 U2OS_siControl_DMSO_1_RNAseq
GSM4943740 U2OS_siControl_DMSO_2_RNAseq
GSM4943741 U2OS_siControl_DMSO_3_RNAseq
This SubSeries is part of SuperSeries:
GSE162184 Tumor suppressor p53 employs RFX7 and ANKRA2
Relations
BioProject PRJNA680777
SRA SRP294152

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE162162_DESeq2_U2OS_siANKRA2_Nutlin-vs-DMSO.tsv.gz 1.6 Mb (ftp)(http) TSV
GSE162162_DESeq2_U2OS_siControl-vs-siANKRA2_DMSO.tsv.gz 1.9 Mb (ftp)(http) TSV
GSE162162_DESeq2_U2OS_siControl-vs-siANKRA2_Nutlin.tsv.gz 1.9 Mb (ftp)(http) TSV
GSE162162_DESeq2_U2OS_siControl-vs-siRFXANK_DMSO.tsv.gz 1.9 Mb (ftp)(http) TSV
GSE162162_DESeq2_U2OS_siControl-vs-siRFXANK_Nutlin.tsv.gz 1.8 Mb (ftp)(http) TSV
GSE162162_DESeq2_U2OS_siControl_Nutlin-vs-DMSO.tsv.gz 1.9 Mb (ftp)(http) TSV
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Raw data are available in SRA
Processed data are available on Series record

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