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Series GSE161609 Query DataSets for GSE161609
Status Public on Nov 17, 2020
Title RNA sequencing comparing mouse Kras G12D lung tumors that have WT or inactivated Mga via CRISPR
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The goal of this study was to compare expression profiles of mouse Kras G12D lung tumors that have inactivated MGA compared to controls
 
Overall design 8 Kras G12D Empty vector control tumors and 6 sgMga Kras G12D tumors were used for expression profiling
 
Contributor(s) Mathsyaraja H, Eisenman RN
Citation(s) 34236315
Submission date Nov 17, 2020
Last update date Jul 20, 2021
Contact name Haritha Mathsyaraja
E-mail(s) hmathsya@fredhutch.org
Organization name Fred Hutch
Department Basic Sciences
Lab Robert N Eisenman
Street address 1100 Fairview Ave N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platforms (1)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
Samples (13)
GSM4910756 Kras G12D LSL mouse (intratracheal instillation of LV2cre Empty lentivirus) [Sample_H8409T2emp]
GSM4910757 Kras G12D LSL mouse (intratracheal instillation of LV2cre Empty lentivirus) [Sample_H8411T1emp]
GSM4910758 Kras G12D LSL mouse (intratracheal instillation of LV2cre Empty lentivirus) [Sample_H8444T1emp]
Relations
BioProject PRJNA678896
SRA SRP292886

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE161609_Kras_tumor.counts.txt.gz 429.6 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record
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