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| Status |
Public on Sep 29, 2021 |
| Title |
RNAseq of Wild Type and GATA-1 mutants in G1E cells |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Purpose: To compare gene regulation changes in GATA-1 mutant compared with wild type
Methods: G1E cells with wild type GATA-1 or mutant were induced by β-estrodiol
Results: We mapped the sequence reads to the mouse genome (build mm10) with TopHat workflow. Some of altered expression of genes was confirmed with qRT–PCR.
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| |
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| Overall design |
Gene expression profile of G1E cells with Wild Type or GATA-1 mutants.
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| |
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| Contributor(s) |
Yan B, Qiu Y |
| Citation(s) |
34450641 |
| |
| Submission date |
Nov 17, 2020 |
| Last update date |
Sep 30, 2021 |
| Contact name |
Bowen Yan |
| Organization name |
PENNSYLVANIA STATE UNIV
|
| Street address |
HERSHEY MED CTR 500 UNIVERSITY DRIVE 500 UNIVERSITY DRIVE
|
| City |
Hershey |
| State/province |
PA |
| ZIP/Postal code |
17033-0446 |
| Country |
USA |
| |
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| Platforms (1) |
| GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
| Samples (4)
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| Relations |
| BioProject |
PRJNA678895 |
| SRA |
SRP292885 |
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