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GEO accession:
Series GSE160840
Query DataSets for GSE160840
Status
Public on Nov 05, 2020
Title
Brd2/4 and Myc regulate alternative cell lineage programs during early osteoclast development
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Nov 04, 2020
Last update date
Nov 07, 2020
Contact name
Anastasios Karadimitris
E-mail(s)
a.karadimitris@imperial.ac.uk
Phone
+44 20 3313 8438
Organization name
Imperial College London
Department
Department of Immunology and Inflammation
Lab
Karadimitris' Lab
Street address
Hammersmith Campus, Du Cane Road
City
London
ZIP/Postal code
W12 0NN
Country
United Kingdom
Platforms (1)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
Samples (75)
Less...
More...
GSM4880180
Control(h0) rep1 [RNA-seq]
GSM4880181
Control(h0) rep2 [RNA-seq]
GSM4880182
RANKL h4 rep1 [RNA-seq]
GSM4880183
RANKL h4 rep2 [RNA-seq]
GSM4880184
IBET h4 rep1 [RNA-seq]
GSM4880185
IBET h4 rep2 [RNA-seq]
GSM4880186
RI h4 rep1 [RNA-seq]
GSM4880187
RI h4 rep2 [RNA-seq]
GSM4880188
RANKL h14 rep1 [RNA-seq]
GSM4880189
RANKL h14 rep2 [RNA-seq]
GSM4880190
IBET h14 rep1 [RNA-seq]
GSM4880191
IBET h14 rep2 [RNA-seq]
GSM4880192
RI h14 rep1 [RNA-seq]
GSM4880193
RI h14 rep2 [RNA-seq]
GSM4880194
RANKL h24 rep1 [RNA-seq]
GSM4880195
RANKL h24 rep2 [RNA-seq]
GSM4880196
IBET h24 rep1 [RNA-seq]
GSM4880197
IBET h24 rep2 [RNA-seq]
GSM4880198
RI h24 rep1 [RNA-seq]
GSM4880199
RI h24 rep2 [RNA-seq]
GSM4880200
Raw rep1 [ATAC-seq]
GSM4880201
RANKL rep1 [ATAC-seq]
GSM4880202
RI rep1 [ATAC-seq]
GSM4880203
Raw rep2 [ATAC-seq]
GSM4880204
RANKL rep2 [ATAC-seq]
GSM4880205
IBET rep2 [ATAC-seq]
GSM4880206
RI rep2 [ATAC-seq]
GSM4880207
MYC Raw [ChIP-seq_MYC_MAX]
GSM4880208
MYC RANKL [ChIP-seq_MYC_MAX]
GSM4880209
MYC IBET [ChIP-seq_MYC_MAX]
GSM4880210
MYC RI [ChIP-seq_MYC_MAX]
GSM4880211
MAX Raw [ChIP-seq_MYC_MAX]
GSM4880212
MAX RANKL [ChIP-seq_MYC_MAX]
GSM4880213
MAX IBET [ChIP-seq_MYC_MAX]
GSM4880214
MAX RI [ChIP-seq_MYC_MAX]
GSM4880215
INPUT Raw [ChIP-seq_MYC_MAX]
GSM4880216
INPUT RANKL [ChIP-seq_MYC_MAX]
GSM4880217
INPUT IBET [ChIP-seq_MYC_MAX]
GSM4880218
INPUT RI [ChIP-seq_MYC_MAX]
GSM4880231
BRD2 Raw [ChIP-seq_BRD]
GSM4880232
BRD2 RANKL [ChIP-seq_BRD]
GSM4880233
BRD2 IBET [ChIP-seq_BRD]
GSM4880234
BRD2 RI [ChIP-seq_BRD]
GSM4880235
BRD3 Raw [ChIP-seq_BRD]
GSM4880236
BRD3 RANKL [ChIP-seq_BRD]
GSM4880237
BRD3 IBET [ChIP-seq_BRD]
GSM4880238
BRD3 RI [ChIP-seq_BRD]
GSM4880239
BRD4 Raw [ChIP-seq_BRD]
GSM4880240
BRD4 RANKL [ChIP-seq_BRD]
GSM4880241
BRD4 IBET [ChIP-seq_BRD]
GSM4880242
BRD4 RI [ChIP-seq_BRD]
GSM4880243
INPUT Raw [ChIP-seq_BRD]
GSM4880244
INPUT RANKL [ChIP-seq_BRD]
GSM4880245
INPUT IBET [ChIP-seq_BRD]
GSM4880246
INPUT RI [ChIP-seq_BRD]
GSM4880247
Raw rep1 [ChIP-seq_H3K27ac]
GSM4880248
RANKL rep1 [ChIP-seq_H3K27ac]
GSM4880249
RI rep1 [ChIP-seq_H3K27ac]
GSM4880250
Raw rep2 [ChIP-seq_H3K27ac]
GSM4880251
RANKL rep2 [ChIP-seq_H3K27ac]
GSM4880252
RI rep2 [ChIP-seq_H3K27ac]
GSM4880253
Raw rep3 [ChIP-seq_H3K27ac]
GSM4880254
RANKL rep3 [ChIP-seq_H3K27ac]
GSM4880255
IBET rep3 [ChIP-seq_H3K27ac]
GSM4880256
RI rep3 [ChIP-seq_H3K27ac]
GSM4880257
INPUT Raw rep1 [ChIP-seq_H3K27ac]
GSM4880258
INPUT RANKL rep1 [ChIP-seq_H3K27ac]
GSM4880259
INPUT RI rep1 [ChIP-seq_H3K27ac]
GSM4880260
INPUT Raw rep2 [ChIP-seq_H3K27ac]
GSM4880261
INPUT RANKL rep2 [ChIP-seq_H3K27ac]
GSM4880262
INPUT RI rep2 [ChIP-seq_H3K27ac]
GSM4880263
INPUT Raw rep3 [ChIP-seq_H3K27ac]
GSM4880264
INPUT RANKL rep3 [ChIP-seq_H3K27ac]
GSM4880265
INPUT IBET rep3 [ChIP-seq_H3K27ac]
GSM4880266
INPUT RI rep3 [ChIP-seq_H3K27ac]
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE160834
Brd2/4 and Myc regulate alternative cell lineage programs during early osteoclast development [RNA-seq]
GSE160835
Brd2/4 and Myc regulate alternative cell lineage programs during early osteoclast development [ATAC-seq]
GSE160836
Brd2/4 and Myc regulate alternative cell lineage programs during early osteoclast development [MYC_MAX ChIP-seq]
GSE160838
Brd2/4 and Myc regulate alternative cell lineage programs during early osteoclast development [BRD ChIP-seq]
GSE160839
Brd2/4 and Myc regulate alternative cell lineage programs during early osteoclast development [H3K27ac ChIP-seq]
Relations
BioProject
PRJNA674615
Download family
Format
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MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE160840_RAW.tar
11.7 Gb
(http)
(custom)
TAR (of BED, BROADPEAK, BW, NARROWPEAK)
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