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GEO accession:
Series GSE160539
Query DataSets for GSE160539
Status
Public on Jun 25, 2021
Title
Genetic and pharmacological evidence for kinetic competition between alternative poly(A) sites in yeast
Organism
Saccharomyces cerevisiae
Experiment type
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34232857
Submission date
Oct 30, 2020
Last update date
Jul 20, 2021
Contact name
Rachael Turner
E-mail(s)
rachael.turner@monash.edu
Organization name
Monash University
Department
Biochemistry and Molecular Biology
Street address
Wellington Road
City
Clayton
State/province
Victoria
ZIP/Postal code
3800
Country
Australia
Platforms (2)
GPL17143
Illumina MiSeq (Saccharomyces cerevisiae)
GPL18085
Illumina HiSeq 1500 (Saccharomyces cerevisiae)
Samples (118)
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GSM4874920
0_minutes_R1
GSM4874921
0_minutes_R2
GSM4874922
5_minutes_R1
GSM4874923
5_minutes_R2
GSM4874924
10_minutes_R1
GSM4874925
10_minutes_R2
GSM4874926
20_minutes_R1
GSM4874927
20_minutes_R2
GSM4874928
40_minutes_R1
GSM4874929
40_minutes_R2
GSM4874930
W303_25_R1
GSM4874931
W303_37_R1
GSM4874932
PCF11_25_R1
GSM4874933
PCF11_37_R1
GSM4874934
RNA14_25_R1
GSM4874935
RNA14_37_R1
GSM4874936
FIP1_25_R1
GSM4874937
FIP1_37_R1
GSM4874938
NAB4_25_R1
GSM4874939
NAB4_37_R1
GSM4874940
PAP1_25_R1
GSM4874941
PAP1_37_R1
GSM4874942
YSH1_25_R1
GSM4874943
YSH1_37_R1
GSM4874944
CLP1_25_R1
GSM4874945
CLP1_37_R1
GSM4874946
W303_25_R2
GSM4874947
W303_37_R2
GSM4874948
PCF11_25_R2
GSM4874949
PCF11_37_R2
GSM4874950
RNA14_25_R2
GSM4874951
RNA14_37_R2
GSM4874952
FIP1_25_R2
GSM4874953
FIP1_37_R2
GSM4874954
NAB4_25_R2
GSM4874955
NAB4_37_R2
GSM4874956
PAP1_25_R2
GSM4874957
PAP1_37_R2
GSM4874958
YSH1_25_R2
GSM4874959
YSH1_37_R2
GSM4874960
CLP1_25_R2
GSM4874961
CLP1_37_R2
GSM4875481
W303_R1
GSM4875482
W303_R2
GSM4875483
NRD1_R1
GSM4875484
NRD1_R2
GSM4875485
NAB3_R1
GSM4875486
NAB3_R2
GSM4875487
SEN1_R1
GSM4875488
SEN1_R2
GSM4887530
Untreated_0mins_rep1
GSM4887531
Untreated_0mins_rep2
GSM4887532
DMSO_20mins_rep1
GSM4887533
DMSO_20mins_rep2
GSM4887534
4tU_DMSO_20mins_rep1
GSM4887535
4tU_DMSO_20mins_rep2
GSM4887536
DMSO_cordycein_20mins_rep1
GSM4887537
DMSO_cordycein_20mins_rep2
GSM4887538
4tU_cordycepin_20mins_rep1
GSM4887539
4tU_cordycepin_20mins_rep2
GSM4887540
DMSO_40mins_rep1
GSM4887541
DMSO_40mins_rep2
GSM4887542
4tU_DMSO_40mins_rep1
GSM4887543
4tU_DMSO_40mins_rep2
GSM4887544
DMSO_cordycein_40mins_rep1
GSM4887545
DMSO_cordycein_40mins_rep2
GSM4887546
4tU_cordycepin_40mins_rep1
GSM4887547
4tU_cordycepin_40mins_rep2
GSM4887548
RPB1_wt_untreated_0mins_rep1
GSM4887549
RPB1_wt_untreated_0mins_rep2
GSM4887550
RPB1_wt_4tU_DMSO_20mins_rep1
GSM4887551
RPB1_wt_4tU_DMSO_20mins_rep2
GSM4887552
RPB1_wt_4tU_cordycepin_20mins_rep1
GSM4887553
RPB1_wt_4tU_cordycepin_20mins_rep2
GSM4887554
RPB1_wt_4tU_DMSO_40mins_rep1
GSM4887555
RPB1_wt_4tU_DMSO_40mins_rep2
GSM4887556
RPB1_wt_4tU_cordycepin_40mins_rep1
GSM4887557
RPB1_wt_4tU_cordycepin_40mins_rep2
GSM4887558
rpb1_slow_untreated_0mins_rep1
GSM4887559
rpb1_slow_untreated_0mins_rep2
GSM4887560
rpb1_slow_4tU_DMSO_20mins_rep1
GSM4887561
rpb1_slow_4tU_DMSO_20mins_rep2
GSM4887562
rpb1_slow_4tU_cordycepin_20mins_rep1
GSM4887563
rpb1_slow_4tU_cordycepin_20mins_rep2
GSM4887564
rpb1_slow_4tU_DMSO_40mins_rep1
GSM4887565
rpb1_slow_4tU_DMSO_40mins_rep2
GSM4887566
rpb1_slow_4tU_cordycepin_40mins_rep1
GSM4887567
rpb1_slow_4tU_cordycepin_40mins_rep2
GSM4887568
BY4741
GSM4887569
NAB4-wt
GSM4887570
W303
GSM4887571
clp1-K136A-T137A
GSM4887572
delta_syc1
GSM4887573
fip1-1
GSM4887574
glc7-5
GSM4887575
mpe1-1
GSM4887576
nab3-11
GSM4887577
nab4-1
GSM4887578
nab4-7
GSM4887579
nrd1-5
GSM4887580
nrd1-DCID
GSM4887581
pap1-1
GSM4887582
pcf11-2
GSM4887583
pcf11-13
GSM4887584
pfs2-1
GSM4887585
pta1-1
GSM4887586
pti1-2
GSM4887587
ref2-2
GSM4887588
rna14-1
GSM4887589
rna15-1
GSM4887590
sen1-1
GSM4887591
set1
GSM4887592
ssu72-2
GSM4887593
swd2-2
GSM4887594
yhh1-3
GSM4887595
ysh1-13
GSM4887596
yth1-1
GSM4887597
yth1-4
This SuperSeries is composed of the following SubSeries:
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GSE160537
Genetic and pharmacological evidence for kinetic competition between alternative poly(A) sites in yeast - cordycepin treatment
GSE160538
Genetic and pharmacological evidence for kinetic competition between alternative poly(A) sites in yeast - 3'end cleavage factors
GSE160567
Genetic and pharmacological evidence for kinetic competition between alternative poly(A) sites in yeast - NNS complex
GSE160993
Genetic and pharmacological evidence for kinetic competition between alternative poly(A) sites in yeast - 4tU cordycepin treatment
GSE160994
Genetic and pharmacological evidence for kinetic competition between alternative poly(A) sites in yeast - 4tU cordycepin treatment with rpb1 slow mutant
GSE160995
Genetic and pharmacological evidence for kinetic competition between alternative poly(A) sites in yeast - 3'end cleavage factor mPAT
Relations
BioProject
PRJNA673491
Download family
Format
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