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Series GSE160329 Query DataSets for GSE160329
Status Public on Aug 05, 2021
Title Transcriptional profiling of circulatory monocytes in community-acquired pneumonia
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary In this study, we sought to broaden our understanding of circulatory monocyte functions captured during the acute (on hospital admission; day0) and recovery (one month follow-up) stages of patients diagnosed with community-acquired pneumonia (CAP).
 
Overall design Examination of RNA expression in circulating CD14+ monocytes obtained from CAP patients on hospital admission (CAP; day0), from the same patients after one month recovery (CAP_D28; one month), and age and sex-matched control participants (Healthy_Volunteer; HV).
 
Contributor(s) Scicluna BP, van der Poll T, Brands X
Citation(s) 34399830, 35938048, 38385743
Submission date Oct 28, 2020
Last update date Apr 04, 2024
Contact name Brendon Scicluna
E-mail(s) brendon.scicluna@um.edu.mt
Organization name University of Malta
Street address Msida campus
City Msida
ZIP/Postal code MSD2020
Country Malta
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (166)
GSM4871529 1001_CAP_D0 [RNA-seq]
GSM4871530 1001_CAP_D28 [RNA-seq]
GSM4871531 1002_CAP_D0 [RNA-seq]
This SubSeries is part of SuperSeries:
GSE160331 An epigenetic and transcriptomic signature of immune tolerance in human monocytes by multi-omic integration
Relations
BioProject PRJNA672968
SRA SRP289520

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE160329_RAW.tar 32.7 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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