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Series GSE159473 Query DataSets for GSE159473
Status Public on Feb 15, 2023
Title EIF5A2 specifically regulates the transcription of aging‑related genes in neuroblastoma cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary In the present study, EIF5A2 overexpression of SH-SY5Y cell model was developed. RNA-seq and RT-qPCR experiments were then performed to explore the molecular mechanism of EIF5A2-mediated transcriptional regulation. Upon EIF5A2 overexpression, genes closely related to unfolded protein response were downregulated. Transcription factors associated with aging, such as ATF4, ATF3 and BHLHE40, were negatively correlated with EIF5A2, which was shown in the EIF5A2 overexpression human neuroblastoma cells in vitro and further verified via the published database of human glial cell tissue.
 
Overall design neuroblastoma cell mRNA profiles of EIF5A2 overexpression and the control group
 
Contributor(s) Ye X
Citation(s) 36750933
Submission date Oct 13, 2020
Last update date Feb 15, 2023
Contact name Dong Chen
Organization name ABLife, Inc.
Department Center for Genome Analysis
Street address 388 GaoXin 2nd Road, East Lake Hi-Tech Development Zone
City Wuhan
State/province Hubei
ZIP/Postal code 430075
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (6)
GSM4830393 Ctrl_1st (EIF5A2 control)
GSM4830394 Ctrl_2nd (EIF5A2 control)
GSM4830395 Ctrl_3rd (EIF5A2 control)
Relations
BioProject PRJNA669018
SRA SRP287276

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE159473_expressed_gene_FPKM.txt.gz 1.0 Mb (ftp)(http) TXT
GSE159473_expressed_gene_reads.txt.gz 1006.6 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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