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GEO accession:
Series GSE159449
Query DataSets for GSE159449
Status
Public on Dec 01, 2020
Title
Epigenetic gene-expression links heart failure to memory impairment
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Non-coding RNA profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
33471428
Submission date
Oct 13, 2020
Last update date
Mar 02, 2021
Contact name
Md Rezaul Islam
E-mail(s)
mrezaulislam33@gmail.com
Organization name
DZNE
Street address
von siebold str. 3a
City
Goettingen
ZIP/Postal code
37075
Country
Germany
Platforms (1)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
Samples (122)
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More...
GSM4829775
transgenic_input [chipseq_tg_wt_3m]
GSM4829776
littermate_control_input [chipseq_tg_wt_3m]
GSM4829777
transgenic_1 [chipseq_tg_wt_3m]
GSM4829778
transgenic_2 [chipseq_tg_wt_3m]
GSM4829779
transgenic_3 [chipseq_tg_wt_3m]
GSM4829780
transgenic_4 [chipseq_tg_wt_3m]
GSM4829781
littermate_control_1 [chipseq_tg_wt_3m]
GSM4829782
littermate_control_2 [chipseq_tg_wt_3m]
GSM4829783
littermate_control_3 [chipseq_tg_wt_3m]
GSM4829784
littermate_control_4 [chipseq_tg_wt_3m]
GSM4829875
wildtype_vehicle_1 [rnaseq_after_saha]
GSM4829876
wildtype_vehicle_2 [rnaseq_after_saha]
GSM4829877
wildtype_vehicle_3 [rnaseq_after_saha]
GSM4829878
wildtype_vehicle_4 [rnaseq_after_saha]
GSM4829879
wildtype_vehicle_5 [rnaseq_after_saha]
GSM4829880
wildtype_vehicle_6 [rnaseq_after_saha]
GSM4829881
wildtype_vehicle_7 [rnaseq_after_saha]
GSM4829882
wildtype_vehicle_8 [rnaseq_after_saha]
GSM4829883
wildtype_vehicle_9 [rnaseq_after_saha]
GSM4829884
wildtype_vehicle_10 [rnaseq_after_saha]
GSM4829885
transgenic_vehicle_1 [rnaseq_after_saha]
GSM4829886
transgenic_vehicle_2 [rnaseq_after_saha]
GSM4829887
transgenic_vehicle_3 [rnaseq_after_saha]
GSM4829888
transgenic_vehicle_4 [rnaseq_after_saha]
GSM4829889
transgenic_vehicle_5 [rnaseq_after_saha]
GSM4829890
transgenic_vehicle_6 [rnaseq_after_saha]
GSM4829891
transgenic_vehicle_7 [rnaseq_after_saha]
GSM4829892
transgenic_vehicle_8 [rnaseq_after_saha]
GSM4829893
transgenic_vehicle_9 [rnaseq_after_saha]
GSM4829894
transgenic_vorinostat_1 [rnaseq_after_saha]
GSM4829895
transgenic_vorinostat_2 [rnaseq_after_saha]
GSM4829896
transgenic_vorinostat_3 [rnaseq_after_saha]
GSM4829897
transgenic_vorinostat_4 [rnaseq_after_saha]
GSM4829898
transgenic_vorinostat_5 [rnaseq_after_saha]
GSM4829899
transgenic_vorinostat_6 [rnaseq_after_saha]
GSM4829900
transgenic_vorinostat_7 [rnaseq_after_saha]
GSM4829901
transgenic_vorinostat_8 [rnaseq_after_saha]
GSM4829902
transgenic_vorinostat_9 [rnaseq_after_saha]
GSM4829903
MI_1 [rnaseq_from_MI_experiment]
GSM4829904
MI_2 [rnaseq_from_MI_experiment]
GSM4829905
MI_3 [rnaseq_from_MI_experiment]
GSM4829906
MI_4 [rnaseq_from_MI_experiment]
GSM4829907
MI_5 [rnaseq_from_MI_experiment]
GSM4829908
MI_6 [rnaseq_from_MI_experiment]
GSM4829909
Sham_1 [rnaseq_from_MI_experiment]
GSM4829910
Sham_2 [rnaseq_from_MI_experiment]
GSM4829911
Sham_3 [rnaseq_from_MI_experiment]
GSM4829912
Sham_4 [rnaseq_from_MI_experiment]
GSM4829913
Sham_5 [rnaseq_from_MI_experiment]
GSM4829914
Sham_6 [rnaseq_from_MI_experiment]
GSM4829915
control_1 [rnaseq_hypoxia_4h]
GSM4829916
control_2 [rnaseq_hypoxia_4h]
GSM4829917
control_3 [rnaseq_hypoxia_4h]
GSM4829918
control_4 [rnaseq_hypoxia_4h]
GSM4829919
control_5 [rnaseq_hypoxia_4h]
GSM4829920
control_6 [rnaseq_hypoxia_4h]
GSM4829921
hypoxia_1 [rnaseq_hypoxia_4h]
GSM4829922
hypoxia_2 [rnaseq_hypoxia_4h]
GSM4829923
hypoxia_3 [rnaseq_hypoxia_4h]
GSM4829924
hypoxia_4 [rnaseq_hypoxia_4h]
GSM4829925
hypoxia_5 [rnaseq_hypoxia_4h]
GSM4829932
transgenic_1 [rnaseq_tg_vs_wt_3m]
GSM4829933
transgenic_2 [rnaseq_tg_vs_wt_3m]
GSM4829934
transgenic_3 [rnaseq_tg_vs_wt_3m]
GSM4829935
transgenic_4 [rnaseq_tg_vs_wt_3m]
GSM4829936
transgenic_5 [rnaseq_tg_vs_wt_3m]
GSM4829937
transgenic_6 [rnaseq_tg_vs_wt_3m]
GSM4829938
control_1 [rnaseq_tg_vs_wt_3m]
GSM4829939
control_2 [rnaseq_tg_vs_wt_3m]
GSM4829940
control_3 [rnaseq_tg_vs_wt_3m]
GSM4829941
control_4 [rnaseq_tg_vs_wt_3m]
GSM4829942
control_5 [rnaseq_tg_vs_wt_3m]
GSM4829943
DMSO6h_mm_rna_sr_islamr_A_1
GSM4829944
DMSO6h_mm_rna_sr_islamr_A_2
GSM4829945
DMSO6h_mm_rna_sr_islamr_A_3
GSM4829946
DMSO6h_mm_rna_sr_islamr_A_4
GSM4829947
Tunica6h_mm_rna_sr_islamr_B_1
GSM4829948
Tunica6h_mm_rna_sr_islamr_B_2
GSM4829949
Tunica6h_mm_rna_sr_islamr_B_3
GSM4829950
Tunica6h_mm_rna_sr_islamr_B_4
GSM4829951
Tunica6h_mm_rna_sr_islamr_B_5
GSM4829952
Tunica6h_mm_rna_sr_islamr_B_6
GSM4829953
wild type vehicle [A_1]
GSM4829954
wild type vehicle [A_2]
GSM4829955
wild type vehicle [A_3]
GSM4829956
wild type vehicle [A_4]
GSM4829957
wild type vehicle [A_5]
GSM4829958
wild type vehicle [A_6]
GSM4829959
wild type vehicle [A_7]
GSM4829960
wild type vehicle [A_8]
GSM4829961
wild type vehicle [A_9]
GSM4829962
transgenic vehicle [B_10]
GSM4829963
transgenic vehicle [B_2]
GSM4829964
transgenic vehicle [B_3]
GSM4829965
transgenic vehicle [B_5]
GSM4829966
transgenic vehicle [B_6]
GSM4829967
transgenic vehicle [B_8]
GSM4829968
transgenic vehicle [B_9]
GSM4829969
transgenic Vorinostat/SAHA [C_1]
GSM4829970
transgenic Vorinostat/SAHA [C_10]
GSM4829971
transgenic Vorinostat/SAHA [C_2]
GSM4829972
transgenic Vorinostat/SAHA [C_3]
GSM4829973
transgenic Vorinostat/SAHA [C_4]
GSM4829974
transgenic Vorinostat/SAHA [C_5]
GSM4829975
transgenic Vorinostat/SAHA [C_6]
GSM4829976
transgenic Vorinostat/SAHA [C_7]
GSM4829977
transgenic Vorinostat/SAHA [C_8]
GSM4829978
transgenic Vorinostat/SAHA [C_9]
GSM4830471
transgenic_vorinostat_1 [chipseq_from_saha_treatment]
GSM4830472
transgenic_vorinostat_2 [chipseq_from_saha_treatment]
GSM4830473
transgenic_vorinostat_3 [chipseq_from_saha_treatment]
GSM4830474
transgenic_vorinostat_4 [chipseq_from_saha_treatment]
GSM4830475
input_transgenic_vorinostat [chipseq_from_saha_treatment]
GSM4830476
transgenic_vehicle_1 [chipseq_from_saha_treatment]
GSM4830477
transgenic_vehicle_2 [chipseq_from_saha_treatment]
GSM4830478
transgenic_vehicle_3 [chipseq_from_saha_treatment]
GSM4830479
transgenic_vehicle_4 [chipseq_from_saha_treatment]
GSM4830480
input_transgenic_vehicle [chipseq_from_saha_treatment]
GSM4830481
wildtype_vehicle_1 [chipseq_from_saha_treatment]
GSM4830482
wildtype_vehicle_2 [chipseq_from_saha_treatment]
GSM4830483
wildtype_vehicle_3 [chipseq_from_saha_treatment]
GSM4830484
input_wildtype_vehicle [chipseq_from_saha_treatment]
This SuperSeries is composed of the following SubSeries:
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More...
GSE159436
Epigenetic gene-expression links heart failure to memory impairment [chipseq_tg_wt_3m]
GSE159441
Epigenetic gene-expression links heart failure to memory impairment [rnaseq_after_saha]
GSE159442
Epigenetic gene-expression links heart failure to memory impairment [rnaseq_from_MI_experiment]
GSE159443
Epigenetic gene-expression links heart failure to memory impairment [rnaseq_hypoxia_4h]
GSE159445
Epigenetic gene-expression links heart failure to memory impairment [rnaseq_tg_vs_wt_3m]
GSE159446
Epigenetic gene-expression links heart failure to memory impairment [rnaseq_tunicamycin_6h]
GSE159447
Epigenetic gene-expression links heart failure to memory impairment [smallrna_after_saha]
GSE159475
Epigenetic gene-expression links heart failure to memory impairment [chipseq_from_saha_treatment]
Relations
BioProject
PRJNA669017
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE159449_RAW.tar
32.1 Mb
(http)
(custom)
TAR (of BED, TXT)
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