|
| Status |
Public on Dec 24, 2020 |
| Title |
H2AK119ub1 ChIP-seq in rat peripheral nerve |
| Organism |
Rattus norvegicus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
ChIP-seq of H2AK119ub1 in sham and injured rat peripheral nerve.
|
| |
|
| Overall design |
H2AK119ub1 ChIP samples were prepared from rat sciatic nerve at 1 day post-transection using both the distal stump of the injured nerve and the contralateral (sham) nerve.
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| |
|
| Contributor(s) |
Ma KH, Svaren J |
| Citation(s) |
34090875 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 NS100510 |
Epigenetic Regulation of Nerve Injury |
UNIVERSITY OF WISCONSIN MADISON |
John P Svaren |
|
| BioProject |
PRJNA260442 |
| |
| Submission date |
Oct 08, 2020 |
| Last update date |
Jan 02, 2022 |
| Contact name |
John Svaren |
| E-mail(s) |
jpsvaren@wisc.edu
|
| Organization name |
University of Wisconsin
|
| Department |
Comparative Biosciences
|
| Lab |
Waisman Center
|
| Street address |
1500 Highland Ave.
|
| City |
Madison |
| State/province |
WI |
| ZIP/Postal code |
53705 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL18694 |
Illumina HiSeq 2500 (Rattus norvegicus) |
|
| Samples (8)
|
| GSM4824514 |
Sham Sciatic nerve H2AK119ub1 ChIP-seq, rep1 |
| GSM4824515 |
Injury Sciatic nerve H2AK119ub1 ChIP-seq, rep1 |
| GSM4824516 |
Sham Sciatic nerve H2AK119ub1 ChIP-seq, rep2 |
| GSM4824517 |
Injury Sciatic nerve H2AK119ub1 ChIP-seq, rep2 |
| GSM4824518 |
Sham Sciatic nerve H2AK119ub1 Input, rep1 |
| GSM4824519 |
Injury Sciatic nerve H2AK119ub1 Input, rep1 |
| GSM4824520 |
Sham Sciatic nerve H2AK119ub1 Input, rep2 |
| GSM4824521 |
Injury Sciatic nerve H2AK119ub1 Input, rep2 |
|
| Relations |
| SRA |
SRP046289 |
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