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Series GSE158826 Query DataSets for GSE158826
Status Public on Oct 01, 2021
Title Effect of Smox deletion and spermidine supplementation on colonic gene expression during carcinogenesis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Effect of Smox deletion and spermidine supplementation on colonic gene expression during carcinogenesis
 
Overall design RNA sequencing by Illumina NovaSeq6000 was performed from colonic tissues of C57BL/6 WT and C57BL/6 Smox-/- mice ± AOM-DSS ± spermidine, after 56 days .
There was three mice per group
 
Contributor(s) Gobert AP, Wilson KT, Latour YL
Citation(s) 34767785
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 DK128200 Spermidine as a New Therapy for Colitis and Chemopreventive for Colitis-associated Carcinogenesis VANDERBILT UNIVERSITY MEDICAL CENTER Keith T. Wilson
Submission date Sep 30, 2020
Last update date Jan 03, 2022
Contact name Alain P Gobert
E-mail(s) alain.p.gobert@vumc.org
Phone 6152780871
Organization name VUMC
Street address 2215B Garland Ave
City Nashville
ZIP/Postal code 37232
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (30)
GSM4811507 WT (4910-AG-1)
GSM4811508 WT (4910-AG-2)
GSM4811509 WT (4910-AG-3)
Relations
BioProject PRJNA666661
SRA SRP285927

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158826_Transcript_RawCounts.csv.gz 1.4 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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