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Series GSE158752 Query DataSets for GSE158752
Status Public on Sep 30, 2020
Title Expression of SARS-CoV-2 receptor ACE2 and coincident host response signature varies by asthma inflammatory phenotype
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Identification and characterization of gene expression using Next Generation Sequencing (NGS) of mRNA sequence from bronchial epithelial cells (BEC) obtained from asthma patients with varying clinical disease severity
 
Overall design Samples were harvested by bronchoscopically obtained endobronchial brushing and subjected to RNA sequencing.
 
Contributor(s) Camiolo M, Ray A, Wenzel SE
Citation(s) 32531372, 34591794
Submission date Sep 29, 2020
Last update date Jan 07, 2022
Contact name Anuradha Ray
Organization name University of Pittsburgh
Department Medicine/Pulmonary
Lab Ray
Street address 3459 Fifth Ave, MUH 628 NW
City Pittsburgh
State/province PA
ZIP/Postal code 15213
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (67)
GSM4809681 IMSA001_EPI_H
GSM4809682 IMSA002_EPI_H
GSM4809683 IMSA004_EPI_S
Relations
BioProject PRJNA666421
SRA SRP285804

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158752_IMSA_BEC-RAW_Counts.txt.gz 2.2 Mb (ftp)(http) TXT
GSE158752_IMSA_BEC_normDESeq2_Combat.txt.gz 5.9 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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