NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE157393 Query DataSets for GSE157393
Status Public on Nov 02, 2020
Title The S phase-induced lncRNA SUNO1 promotes cell proliferation by controlling YAP1/Hippo signaling pathway
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Cell cycle is a cellular process that are subject to stringent control. In contrast to the wealth of knowledge of proteins controlling the cell cycle, very little is known about the molecular role of lncRNAs (long noncoding RNAs) in cell cycle progression. To understand the role of S phase upregulated SUNO1 lncRNA, we performed microarray analyses of control and SUNO1-depleted HCT116 cells.
 
Overall design We performed the microarray in biologicl duplicates. We used to two time points (36 hrs and 72 hrs post siRNA treatment) to identify the gene sets that showed differential expression during early and late time points post SUNO1 depletion.
 
Contributor(s) Prasanth KV
Citation(s) 33108271
Submission date Sep 03, 2020
Last update date Nov 03, 2020
Contact name Yuelin Jack Zhu
E-mail(s) zhujack@mail.nih.gov
Phone (240)760-7439
Organization name NCI
Department Genetics Branch, Center for Cancer Research
Lab Dr. Paul Meltzer's Lab
Street address 9000 Rockville Pike
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (8)
GSM4764017 CTL-72 hrs_rep 1
GSM4764020 CTL-72 hrs_rep 2
GSM4764022 SUNO1 siRNA-72hrs-rep 1
Relations
BioProject PRJNA661194

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE157393_Ashish-LiXL_siRNA_SUNO1_Exp_IL_GEO_GA_raw_data_09022020.tsv.gz 12.7 Mb (ftp)(http) TSV
GSE157393_RAW.tar 26.2 Mb (http)(custom) TAR
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap