NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE156825 Query DataSets for GSE156825
Status Public on Aug 26, 2020
Title The Antiviral Small-Interfering RNA Pathway Induces Zika Virus Resistance in Transgenic Aedes aegypti
Organism Aedes aegypti
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We have generated transgenic Ae. aegypti that express a ZIKV-specific inverted repeat RNA intended to trigger the mosquito siRNA anti-viral immune pathway. To confirm that the transgene is expressed and processed, we performed small RNA sequencing on both Higgs White Eye (HWE) & anti-NS3/4A-ZIKV transgenic Ae. aegypti 24 hours post-bloodmeal
 
Overall design small RNA profiling of 15 midguts from HWE & transgenic anti-NS3/4A-ZIKV Ae. aegypti 24 hours post-bloodmeal
 
Contributor(s) Williams AE, Sanchez-Vargas I, Reid WR, Lin J, Franz AW, Olson KE
Citation(s) 33142991
NIH grant(s)
Grant ID Grant title Affiliation Name
R01 AI130085 Engineering resistance to Zika virus in Aedes aegypti for Cas9 driven population modification COLORADO STATE UNIVERSITY KENNETH E OLSON
Submission date Aug 25, 2020
Last update date Nov 25, 2020
Contact name Ken E Olson
E-mail(s) Kenneth.Olson@ColoState.EDU
Organization name Colorado State University
Department Microbiology, Immunology, Pathology
Street address 3185 Rampart Road
City Fort Collins
State/province CO
ZIP/Postal code 80521
Country USA
 
Platforms (1)
GPL22030 Illumina NextSeq 500 (Aedes aegypti)
Samples (2)
GSM4745099 24pbm_1: HWE_15mgt_sirna_24hbf
GSM4745100 24pbm_2: anti_ZIKV_15mgt_sirna_24hbf
Relations
BioProject PRJNA659285
SRA SRP278820

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE156825_RAW.tar 543.7 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap