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Series GSE156106 Query DataSets for GSE156106
Status Public on Sep 29, 2022
Title Macrophage-mediated abscopal effects of radiation therapy
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Radiation therapy is a mainstay of cancer treatment, with more than 50% of all cancer patients receiving radiation during the course of their disease. Tumor irradiation can activate both innate and adaptive immune responses, and these responses can be pro- or anti-tumor growth . These observations have led to the search for antitumor approaches combining radiotherapy and specific immunotherapies, most commonly strategies promoting the systemic activation of T cells. Thus far, however, many cancer patients still suffer from local recurrence and/or untreatable metastatic disease after radiotherapy. Here we combine radiotherapy with activation of macrophage-mediated phagocytosis via blockade of the ?don?t-eat-me? cell surface molecule CD47 in small-cell lung cancer (SCLC), a highly metastatic form of lung cancer for which treatment options remain limited. We found that irradiation of SCLC cells in culture results in the secretion of inflammatory cytokines that results in increased migration and phagocytosis by macrophages. In vivo, CD47 blockade potently enhances the local antitumor effects of radiation therapy in murine and human pre-clinical models of SCLC. Strikingly, CD47 blockade also stimulates abscopal antitumor effects inhibiting the growth of non-irradiated SCLC tumors in mice receiving radiation. Similar abscopal antitumor effects were observed in colon cancer and lymphoma models. Surprisingly, these abscopal effects are completely independent of T cells but require macrophages that migrate into the non-irradiated tumor sites in response to inflammatory signals mediated by radiation and are locally activated by CD47 blockade to eliminate cancer cells. The systemic activation of antitumor macrophages following radiotherapy and CD47 blockade may be particularly important in cancer patients who suffer from metastatic disease.
 
Overall design Single-cell RNA sequencing (scRNA-seq) of CD45+ leukocytes at non-irradiated sites in mice treated either with radiotherapy alone or radiotherapy and CD47
 
Contributor(s) Nishiga Y, Drainas AP, Sage J
Citation(s) 36411318
Submission date Aug 12, 2020
Last update date Dec 15, 2022
Contact name Yoko Nishiga
E-mail(s) ynishiga@stanford.edu
Organization name Stanford University
Department Departments of Pediatrics and Genetics
Lab Sage lab
Street address 265 Campus Drive
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platforms (2)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (11)
GSM4724773 C2
GSM4724774 C3
GSM4724775 RT1
Relations
BioProject PRJNA656781
SRA SRP277187

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SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE156106_RAW.tar 7.6 Mb (http)(custom) TAR (of TXT)
GSE156106_aggregated_RT+antiCD47_filtered_feature_bc_matrix.tar.gz 166.7 Mb (ftp)(http) TAR
GSE156106_aggregated_RT_filtered_feature_bc_matrix.tar.gz 244.3 Mb (ftp)(http) TAR
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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