|
| Status |
Public on Nov 18, 2020 |
| Title |
Gene expression analyses of four Pisolithus microcarpu strains: Si9, MW3, R4 and R10. Gene expression in Eucalyptus grandis mycorrhizal root tip was compared to gene expression in free-living mycelium for each strain. |
| Organisms |
Eucalyptus grandis; Pisolithus microcarpus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Illumina HiSeq technology was used to generate mRNA profiles from Pisolithus microcarpus Si9, MW3, R4 or R10 ectomycorrhizal root tips compared to their respective free-living mycelium.
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| |
|
| Overall design |
Ectomycorrhizal root tips and control mycelium were harvested after 4 weeks of contact and used for RNA extraction.
|
| |
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| Contributor(s) |
Plett K, Plett JM, Kohler A, Martin F, Anderson I |
| Citation(s) |
33185936 |
| Submission date |
Jul 30, 2020 |
| Last update date |
Feb 17, 2021 |
| Contact name |
Annegret Kohler |
| E-mail(s) |
annegret.kohler@inrae.fr
|
| Phone |
+33 (0)383 394072
|
| Organization name |
INRAE
|
| Department |
UMR 1136
|
| Lab |
Interactions Arbres/Micro-organismes
|
| Street address |
Centre INRAE Grand Est Nancy
|
| City |
Champenoux |
| ZIP/Postal code |
54280 |
| Country |
France |
| |
|
| Platforms (2) |
| GPL19282 |
Illumina HiSeq 1500 (Eucalyptus grandis; Pisolithus microcarpus) |
| GPL28947 |
Illumina HiSeq 1500 (Pisolithus microcarpus) |
|
| Samples (23)
|
|
| Relations |
| BioProject |
PRJNA649705 |
| SRA |
SRP274295 |
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