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Series GSE154677 Query DataSets for GSE154677
Status Public on Jul 19, 2020
Title Zinc Uptake and Storage During the Formation of the Cerebral Cortex in Mice
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary The aim of this work was to analyse the transcriptome of the mice cerebral cortex (or neocortex) during embryogenesis and at post-natal age. This complete transcriptomic analysis was dedicated to the analysis of the genes participating in the homeostasis of Zinc during brain development and formation.
Our study represents a detailed analysis of transcriptomes during formation and dvelopment of the brain cortex, with biologic triplicates, generated by RNA-seq technology. This will provide a framework for comparative investigations of expression profiles. Our work offers an accurate quantitative and qualitative evaluation of mRNA content during mice embryogenesis.
 
Overall design Total mRNA from cerebral cortices of C57Bl6/J mice were generated in triplicate. Tissues were collected at embryonic days 11 (E11), E13, E17 and on post-natal day 1 pups.
 
Contributor(s) Bouron A, Hasna J, Bohic S, Blugeon C, Lemoine S
Citation(s) 30941734, 35974412
Submission date Jul 18, 2020
Last update date Aug 26, 2022
Contact name Stephane Le Crom
Organization name IBENS
Department Genomic Core Facility
Street address 46 rue Ulm
City PARIS
ZIP/Postal code 75230
Country France
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (12)
GSM4676914 E11-A
GSM4676915 E11-B
GSM4676916 E11-C
Relations
BioProject PRJNA647118
SRA SRP272450

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE154677_RAW.tar 2.3 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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