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| Status |
Public on Aug 30, 2021 |
| Title |
Temporal inhibition of chromatin looping and enhancer accessibility during neuronal remodeling. |
| Organism |
Drosophila melanogaster |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Other
|
| Summary |
We report the 4C-seq data and ChIP-seq to study Shep regulation of chromatin looping. We also reported ATAC-seq and CUT&Tag data on sorted neurons that reveal chromatin accessibility and states during the neuronal remodeling of Drosophila melanogaster
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| |
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| Overall design |
Examine regulation of chromatin looping, accessibility and states during neuronal remodeling
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| |
|
| Contributor(s) |
Chen D, McManus C, Radmanesh B, Matzat L, Lei E |
| Citation(s) |
34737269 |
| |
| Submission date |
Jul 17, 2020 |
| Last update date |
Nov 29, 2021 |
| Contact name |
Dahong Chen |
| Organization name |
SUNY Buffalo
|
| Street address |
955 Main Street
|
| City |
Buffalo |
| State/province |
Other |
| ZIP/Postal code |
14203 |
| Country |
USA |
| |
|
| Platforms (3) |
| GPL16479 |
Illumina MiSeq (Drosophila melanogaster) |
| GPL17275 |
Illumina HiSeq 2500 (Drosophila melanogaster) |
| GPL19132 |
Illumina NextSeq 500 (Drosophila melanogaster) |
|
| Samples (23)
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| Relations |
| BioProject |
PRJNA646944 |
| SRA |
SRP272379 |
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