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Series GSE153716 Query DataSets for GSE153716
Status Public on Jul 15, 2020
Title TMBIM6/BI-1 contributes to cancer progression through assembly with mTORC2 and AKT activation
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Transmembrane B cell lymphoma 2-associated X protein inhibitor motif-containing (TMBIM) 6, a Ca2+ channel-like protein, is highly upregulated in several cancer types. Here, we show that TMBIM6 is closely associated with survival in patients with cervical, breast, lung, and prostate cancer. TMBIM6 deletion or knockdown suppressed primary tumor growth. Further, mTORC2 activation was up-regulated by TMBIM6 and stimulated glycolysis, protein synthesis, and the expression of lipid synthesis genes and glycosylated proteins. Moreover, ER-leaky Ca2+ from TMBIM6, a unique characteristic, was shown to affect mTORC2 assembly and its association with ribosomes. In addition, we identified that BIA compound, a suggestive TMBIM6 antagonist, prevented TMBIM6 binding to mTORC2, decreased mTORC2 activity, and also regulated TMBIM6-leaky Ca2+, further suppressing tumor formation and progression in cancer xenograft models. This previously unknown signaling cascade in which mTORC2 activity is enhanced via the interaction with TMBIM6 provides effective therapeutic targets for various malignancies.
We used microarrays to detail the global of gene expression and identified that most of the differentially expressed genes related to apoptotic process, migration, proliferation, and metabolic pathways were decreased in TMBIM6 KO HT1080 cells
 
Overall design Transcriptome profiling of TMBIM6 wild type and knock out HT1080 cells using Affymetrix GeneChip Human Gene 2.0 ST oligonucleotide Array. Two replicates of cells for each cell type were performed.
 
Contributor(s) Kim H, chae H
Citation(s) 32782388
Submission date Jul 02, 2020
Last update date Aug 24, 2020
Contact name Hyun-Kyoung Kim
E-mail(s) khkyoung11@jbnu.ac.kr
Organization name Jeonbuk National University
Department Department of Pharmacology
Street address 567 Baekje-daero, Deokjin-gu
City Jeonju
ZIP/Postal code 54896
Country South Korea
 
Platforms (1)
GPL16686 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [transcript (gene) version]
Samples (4)
GSM4650168 HT1080 wild type, biological rep1
GSM4650169 HT1080 wild type, biological rep2
GSM4650170 TMBIM6 KO HT1080, biological rep1
Relations
BioProject PRJNA643795

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE153716_RAW.tar 30.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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